ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_24940_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(21587..24499)

Top 3 Functional Annotations

Value Algorithm Source
Aminomethyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SED4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 969.0
  • Bit_score: 1362
  • Evalue 0.0
Aminomethyltransferase {ECO:0000313|EMBL:AHB48852.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 969.0
  • Bit_score: 1362
  • Evalue 0.0
aminomethyltransferase similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 969.0
  • Bit_score: 1362
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2913
ATGAGCGCGAGCGCCGCACCCCGCCTCGGCCCGGACGGCTGGGGCCTCCTGATCGACCGCGCCAGGCCGGTGTCCTTCACCTTCGACGGCGTCGCCTGCCACGGCTATCGGGGCGACGTGATCGCCAGCGCGCTGGTCGGCTCCGGCCGCTGGCTGATGTCGCGCTCCTTCAAGTATCACCGCCCGCGCGGGCCGCTGACCATGGCCGGCCACGACGTCAACGCGCTGGTGCAGGTCGGACCCGAGCCGAACGTGCGCGGCGACCGCCATCCCATCGCCCAGGACATGGCCGCCGTCTCGGTCAACCATTTCGGCTCGCTCGACGGCGACTGGTACGCCGTGCTGGAGCGCTTCGGCCGCTTCCTCCCCGTCGGCTTCTACTACAAGACCTTCTTCCGCCCGAACGGCTCGTGGAAGCTGTTCGAGAAGCCGATCCGCGCGCTGGCGGGCCTGGGCAAGCTCGATCCGAAGGCGCATCACGGCCATTACGACAAGGCCTATCTGTTCTGCGACGTGCTGGTCGCCGGCGGCGGTCCGGCCGGCCTGGAGGCGGCGATCGCGGCGGCTGAGGCCGGCGCCGAGACGCTGCTGATCGACGAATGGCCCGAGCTCGGCGGCTCGCTGCTGCACGGCCGCGGCGGCGCCGGGCGCGCCGCCACCGACGCGCGCCGGGCGGCGCTGGTCGCCAGGGCCCGCGCCCTGCCCGGCCTCACCATCCTCGGCGACACCACGGTCTCGGGCCTGTTCGCCGACAACTGGGCCTCGGCCATCTCGGGCAACCGGCTCTACAAGATTCGCGCGCGCGAGACCGTGCTCGCCACCGGCGCCTTCGACCAGCCGCTGGTGTTCCGCAACAACGACCGGCCGGGCATCCTGTTCGCCGATGCGGCACAGCGGCTCATGCGGCTCTATGGCGTCCGGCCCGGCCGGCGCGCCGTGATCGCCACCGCCAACCGCTTCGGCTACGAGGCGGCGCTCGACCTCCTCGACGCCGGCGTCGAGGTCGCGGCCATCGTCGACCTCAACCCGTCCGGCGACGGAGAGGCGGCGGCCGAGGCGCGGGCGCGGGGCCTGCGCATCATCGCCGGCTCCACCCTGGTCGAGGCCCGCGGCAAGGTCCGGGTCGAGGCGGTGGCCGTCGCGGCGATCGCGGGCGAGGGCAGGACCGCCGGCAGCCCGGAATGGATCGGCTGCGATACCGTGCTGATGAGCGTCGGCTACACCCCCGCCCTCAACCTCGCCAGCCATGCCGGGGCGAAGGTGATCTACGATCCCGCCATCGCCATGCATCGCGCCGTCGACCTGCCGCCGGGCGTGACGCTGGTGGGCGCGGCCGCCGGCCTGTGGTCGGAGGAGACGGTGAGCGCGGATGCGCGCGCCGCCGGCGTCCGGGTCGCGGCGGCCGCCCTCGACCGGCCGGCCGCGGCATCGGCGCTGACGGCCGATCCGGGCGCGGCGCGCATCACCCATCCCTGGCCGATCTTCTCCGACCCCAAGGCCAAGGACTTCGTCGACTTCGACGAGGACCTGCAGACCAAGGACATCGTCCATTCCGTCCAGGACGGCTATGACGACATCCAGCTGGTCAAGCGCTACTCCACCGCCGGGCTCGGCCCGAGCCAGGGCCGGCACGCCAACCTCAACACCATCCGCCTGGTGGCGAAGGAGACCGGCCGCAGCATCGCGGCGGTCGGCACCACCACCTTCCGCCCGCCGCTGGTGCCGGAGAAGTTCGGCCACATGGCCGGCCGGGCCTTCGAGCCGGTGCGCCACACGGCGATGCATCACCGCCATCTCGAGCTCGGCGCGCAGATGATGCCGGCGGGCCTGTGGCTGCGGCCGGCCTATTACGGCCGCAAGGGCGCGTCGGCGGACGCGATCGAGGCGGAGGTGCGGGCGGTGCGCGAGGGCGTCGGCATGATCGACGTCTCCACCCTGGGCGGGCTCGACATCCGCGGCCCCGACGCGGCCGAGCTCGTCGACCGCATGTACACCTGGGCCTATGCCAAGCAGCCGGTCGGCCGCGCCCGCTACGCCCTGATGACCGACCAGACCGGCGTGGTCATCGACGACGGCGTCGCCTGCCGCTTCCACGAGCGGCACTATTACCTCACCGCCACGACAGGTGCCGTCGACCAGGTCTATCGCCAGATGACCTGGTGGAACACGCAGTGGCGGCTCGACGTCGACATCGCCAACGTCACCGCCGCCTATGCCGGCGTCAACCTCGCCGGGCCGAAGGCGCGCGAGGCGCTGGCCGGGCTGGAGACCGACATCGACTTCTCGGCCGAGGCCTTCCCCTACATGGCGGTGCGCCAGGGCCGGCTCGCCGGCATCCCCGTGCGGGTGCTGCGCGTCGGCTTCGTCGGCGAGCTCGGCTACGAGATCCATTGCCCCTCGGGCCTGGGCGAAGCGCTGTGGGACCGGCTGTTCGAGGCCGGGCAACCCTTCGGCCTGAGGCCGTTCGGCGTCGAGGCGCAGCGCGTGCTGCGCCTGGAGAAGGGCCACATCATCGTCGGCCAGGACACGGACGGGCTCACCAACCCGGCCGAGGCCGGCATGGAATGGGCGCTGGCCAAGAAGAAGCCGTTCTATGTCGGCAAGCGCGCCGTCGAGATGCAGATGGGCAAGGGCGTCACCCGGCGCCTCGTCGGCTTCGCCCTGGCCGATCCGGCCGCGCCCTGCCCGAAGGAGTGCCACCTCGTCATCCGCGACGGCGACATCGCCGGCCGGGTCACCTCGGCGGTGCGCTCGCCCTCGCTCGACAAGGTGGTGGGCCTCGCCTATGTGCCCTCCGACCTCGCCGCGCCCGGCTCGCGCTTCGAGATCCGCATCGAGGGCGGGCGCATGATCGGCGCCGAGGTGGTGGCGACGCCGTTCTACGACCCCGAGAACAAGCGCCAGGAGCTCTAG
PROTEIN sequence
Length: 971
MSASAAPRLGPDGWGLLIDRARPVSFTFDGVACHGYRGDVIASALVGSGRWLMSRSFKYHRPRGPLTMAGHDVNALVQVGPEPNVRGDRHPIAQDMAAVSVNHFGSLDGDWYAVLERFGRFLPVGFYYKTFFRPNGSWKLFEKPIRALAGLGKLDPKAHHGHYDKAYLFCDVLVAGGGPAGLEAAIAAAEAGAETLLIDEWPELGGSLLHGRGGAGRAATDARRAALVARARALPGLTILGDTTVSGLFADNWASAISGNRLYKIRARETVLATGAFDQPLVFRNNDRPGILFADAAQRLMRLYGVRPGRRAVIATANRFGYEAALDLLDAGVEVAAIVDLNPSGDGEAAAEARARGLRIIAGSTLVEARGKVRVEAVAVAAIAGEGRTAGSPEWIGCDTVLMSVGYTPALNLASHAGAKVIYDPAIAMHRAVDLPPGVTLVGAAAGLWSEETVSADARAAGVRVAAAALDRPAAASALTADPGAARITHPWPIFSDPKAKDFVDFDEDLQTKDIVHSVQDGYDDIQLVKRYSTAGLGPSQGRHANLNTIRLVAKETGRSIAAVGTTTFRPPLVPEKFGHMAGRAFEPVRHTAMHHRHLELGAQMMPAGLWLRPAYYGRKGASADAIEAEVRAVREGVGMIDVSTLGGLDIRGPDAAELVDRMYTWAYAKQPVGRARYALMTDQTGVVIDDGVACRFHERHYYLTATTGAVDQVYRQMTWWNTQWRLDVDIANVTAAYAGVNLAGPKAREALAGLETDIDFSAEAFPYMAVRQGRLAGIPVRVLRVGFVGELGYEIHCPSGLGEALWDRLFEAGQPFGLRPFGVEAQRVLRLEKGHIIVGQDTDGLTNPAEAGMEWALAKKKPFYVGKRAVEMQMGKGVTRRLVGFALADPAAPCPKECHLVIRDGDIAGRVTSAVRSPSLDKVVGLAYVPSDLAAPGSRFEIRIEGGRMIGAEVVATPFYDPENKRQEL*