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berkeley_reactor_200306_biofilm_scaffold_27699_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3..674)

Top 3 Functional Annotations

Value Algorithm Source
Putative 2-ketoarginine decarboxylase AruI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C836_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 224.0
  • Bit_score: 351
  • Evalue 5.00e-94
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 223.0
  • Bit_score: 264
  • Evalue 2.30e-68
Uncharacterized protein {ECO:0000313|EMBL:EZO97333.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 223.0
  • Bit_score: 264
  • Evalue 8.70e-68

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGTCCGATGCGATCTCCTGCGGCAGCCGCCTGATGCAGCTGCTCAGCGCCTATGGCGTCGACACCGTGTTCGGCATGCCCGGCGTCCACACGCTCGAAGCCTATCGCGGCCTGGAGGCCGCCGGCATCCGCCATGTCGGCGTGCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTATGCCCGGATGTCGGGCCGCCCCGGCGTCTGCCTGCTGATCAGCGGGCCCGGCGTCACCAACGCCGCGACCCCGATCGGCCAGGCCTATTCCGACAGCGTGCCCATGCTGGTGATCACCAGCGTCGCCGCCAACAAGGACCTCGGCATGGGGCGCGGACGCCTGCACGAGATCACCGACCAGGCGCGGGTGACCGAGCCGCTGACCGCCTTCTCCGCCGTCGCCGGCGACCCGCAGCAGGTGCGCGAACATGTGGCGCGCGCCTTCGCCCTGTTCGAGGCGCGCCGGGCGCGGCCGGTGCACATCTCCCTCCCGCTCGACGGGTTCACGGCGCCGGACGACCAGCCGGTGCGGCGGCGGACGGCGCACCGGCGCGCCGCGCCCGACCCTGAGGCCGTGGCGGCCGCCGCGGCCCGCCTCGCCGGCGCGGCGCGCCCGGTCATCATCGCCGGCGGCGGCAGCCTCGGGGCCTCGGCCGCGCTGGTCGCGCTC
PROTEIN sequence
Length: 224
MSDAISCGSRLMQLLSAYGVDTVFGMPGVHTLEAYRGLEAAGIRHVGVRHEQGAGFMADGYARMSGRPGVCLLISGPGVTNAATPIGQAYSDSVPMLVITSVAANKDLGMGRGRLHEITDQARVTEPLTAFSAVAGDPQQVREHVARAFALFEARRARPVHISLPLDGFTAPDDQPVRRRTAHRRAAPDPEAVAAAAARLAGAARPVIIAGGGSLGASAALVAL