ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_27699_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1408..2103)

Top 3 Functional Annotations

Value Algorithm Source
Dimethylmenaquinone methyltransferase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RP28_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 207.0
  • Bit_score: 212
  • Evalue 2.90e-52
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EYR84439.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 231.0
  • Bit_score: 378
  • Evalue 4.30e-102
dimethylmenaquinone methyltransferase similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 214.0
  • Bit_score: 203
  • Evalue 4.90e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGCCCATCACCTCCTATCGGATCGCCGACGTTCCGGCGCAGATCGACGCCGCGCTCCTGGCCCGCTTCGCCCGGGTCGAGGCGGCGACGATCGGCCACTACCTGCACGACCGCTTCATGCGCAACGACCTGCGGCCGCTGATCGAGGGCGCACGCGTCGCCGGCACGGCGGTGACGGTGTCGATCGCCGGGGCCGATTCGACGCTGCTCTACCACGCCATGGACCGGGTCCGGCCGGGCGACGTCCTGGTGATCGATCGCTGCGGCGACGAGCGGCATGCGCCCTGGGGCGGCTTCATGGCGGCGGTGGCGAAGATCCGCGGTCTCGCCGGCGTGATCGTCGACGGGGCGGTGACCGATCCGGCGGCGATCCGCGAGGCCGGCGTGCCGACCTGGGCGCGGGGAGTTTCGCCGATCACCACCAAGCTCCTCAATCTCGGCGGCGGCTTCAACATCCCGGTCGCCTGCGGCGGCGTCGCGGTCAACCCGGGCGACGCCGTGCTGGCGGACGATTGCGGCATCGTCGTGCTGCCGCCCGACCAGGTCGCCGGCATCACCGCGGTGGCGCTGGCGGACCAGGAGGACGAGGGCGGCTGGCTCCGGCGCGTCGCCGCCGGCGAGCGCCTGCAGGACCTCGTCGACGTCGCCGACATGATCGCCGAGCGCCGCCGTCTCGACGAGGCCGCCCATGGCTGA
PROTEIN sequence
Length: 232
MPITSYRIADVPAQIDAALLARFARVEAATIGHYLHDRFMRNDLRPLIEGARVAGTAVTVSIAGADSTLLYHAMDRVRPGDVLVIDRCGDERHAPWGGFMAAVAKIRGLAGVIVDGAVTDPAAIREAGVPTWARGVSPITTKLLNLGGGFNIPVACGGVAVNPGDAVLADDCGIVVLPPDQVAGITAVALADQEDEGGWLRRVAAGERLQDLVDVADMIAERRRLDEAAHG*