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berkeley_reactor_200306_biofilm_scaffold_27699_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(9918..11123)

Top 3 Functional Annotations

Value Algorithm Source
D-alanine--D-alanine ligase (EC:6.3.2.4) similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 406.0
  • Bit_score: 438
  • Evalue 2.10e-120
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 406.0
  • Bit_score: 438
  • Evalue 1.00e-119
D-alanine--D-alanine ligase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DLD4_DESVM similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 406.0
  • Bit_score: 438
  • Evalue 7.30e-120

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Taxonomy

Desulfovibrio vulgaris → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGGCGAAGACGCGGGTGGCGGTGCTGTTCGGCGGGCGCTCGCCGGAGCACGATGTGTCCGTCGTATCCGGGCTGCAGGCGCTGAACGCGCTCGACACCGGCAAGTACGACGCCTTCCCCGTCTATGTCGCCACGGACGGCGCCTGGCTCACCGGCGATGCGCTGCGCAACCGCGCGCTCTACATCCCCGACGAGGCCGCCCGGGCCACCCTCACCCGCGTCGACCTCGACCTCTCCGCCGGCAAAGGCGTCCTGGTGCCACGGGTCAAGCCGAGGCTGTTCGGCCGCAAGCCCGAGCCGATCGGCTTCGACGTCGCCCTGCTCGCCTTCCACGGCACGATCGGCGAGGACGGCCCGATCCAGGGCGTGTTCGAGACCGCCAACGTGCCTTATACCGGCATGCGCCTCCTCGCCTCGGCCATCCTGATGGACAAGGAGGTCACCAAGCGCGCCATCGCCGGGCGCGGCATCAACGTCCTCGGCGATGCGGTGGTGGAGCGTCCCGCCACCGGACTGGTGCCCGACAAGGCCACGCTCGAGGCGGCGCTGCGCAACATCGCCTTTCCGGTGATCGTCAAGCCGGCGCATCTCGGCTCCTCGATCGGCGTCTCCAAGGCCGACGACCTCGACACGGTGCGGGCCGTGCTGCCCGGCATCTTCAAGTTCGACAGAACCGCGATCGTCGAGCCCTTCGTCGACAACCTGGTCGAATACAACGTCGCGGTGAGCCGTGTCGGTGGCGCGGTGCGGACCTCGGCGATCGAGCGACCGAAGCGGGCGAGCGAACTGCTCGACTTCAAGACCAAGTACATGTCCGGCGGCGGGGCCAAGAAGACCGGCGGCAAGCAGCCCGGCGCGTCCAGCCAGGGCATGCTGTCGCTGACGCGCGACATCAACCCCGAGCTGCCGCCCGAGCTCGAGCGCAAGATCCGCAGCTGGGCGAGCGAGGCCTATGTCGCGGTCGGCGGCACCGGCGCGCCGCGCATCGACTTCCTCTCGAACGAGAAGACCGGCGAGATCTGGCTCAACGAGGTCAACCCCTGCCCGGGCTCCTTCGGCTATTTCCTGTGGGAGGCGGCGGAGAAGCCGGTGCTGTTCACGGCGCTGCTCGACCATCTCATCGAGGAGGCGCGGCTCTGCCATCGCGCGGTGCAGCTGCCGAGCGACCCGACGCCGACCGACGCCCGGCTGTTCCGCCGGCCCTGA
PROTEIN sequence
Length: 402
MAKTRVAVLFGGRSPEHDVSVVSGLQALNALDTGKYDAFPVYVATDGAWLTGDALRNRALYIPDEAARATLTRVDLDLSAGKGVLVPRVKPRLFGRKPEPIGFDVALLAFHGTIGEDGPIQGVFETANVPYTGMRLLASAILMDKEVTKRAIAGRGINVLGDAVVERPATGLVPDKATLEAALRNIAFPVIVKPAHLGSSIGVSKADDLDTVRAVLPGIFKFDRTAIVEPFVDNLVEYNVAVSRVGGAVRTSAIERPKRASELLDFKTKYMSGGGAKKTGGKQPGASSQGMLSLTRDINPELPPELERKIRSWASEAYVAVGGTGAPRIDFLSNEKTGEIWLNEVNPCPGSFGYFLWEAAEKPVLFTALLDHLIEEARLCHRAVQLPSDPTPTDARLFRRP*