ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_34479_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1894..2241

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B2E8E2 similarity UNIREF
DB: UNIREF100
  • Identity: 25.5
  • Coverage: 110.0
  • Bit_score: 60
  • Evalue 1.20e-06
Uncharacterized protein {ECO:0000313|EMBL:KCZ52926.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 111.0
  • Bit_score: 110
  • Evalue 8.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomonas beringensis → Hyphomonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGATAGATCCTTATTTTTGCAAGCTATACATAGATACGGACGAGCTCCGTGATGATCTGCAAAGAAGTATGGATTATATGGTTAAGAAATTTTGCCAGGGGATACCAGTGGAGGCTCCCGTTCTTAAGAACGAAGATTTCGATGCATCTTTTAAGTCAAAAGTACCTTACCGCTTCATCGAATGTTCACGGTACTACGCGGAAGTCGGAACCATCGATGACGAGCCGCGATATATAGCCGGCTTCCAGGCCGGCATGGCAGCTCTGGTCAAGGCACTCCGGCAGGGCAACCGGACCGTTACGGTGGCTTGTGACTTCGAAGATATGATCGAAGGCGAGGCCGAGTAG
PROTEIN sequence
Length: 116
MIDPYFCKLYIDTDELRDDLQRSMDYMVKKFCQGIPVEAPVLKNEDFDASFKSKVPYRFIECSRYYAEVGTIDDEPRYIAGFQAGMAALVKALRQGNRTVTVACDFEDMIEGEAE*