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berkeley_reactor_200306_biofilm_scaffold_34479_52

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 58130..59401

Top 3 Functional Annotations

Value Algorithm Source
ROK family transcriptional regulator n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036ED8C4 similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 398.0
  • Bit_score: 446
  • Evalue 1.70e-122
ROK family transcriptional regulator {ECO:0000313|EMBL:KKB81782.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 403.0
  • Bit_score: 446
  • Evalue 4.00e-122
ROK family protein similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 398.0
  • Bit_score: 444
  • Evalue 3.00e-122

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Taxonomy

Devosia insulae → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGTCGCGCAAGGGCAGCAATTCGGTCCAGATCCGCCATTACAACGAGCGGGTGGTGCTGGAGGCGCTGCGCCGCATGGGCGAGGCGTCCAAGGCCGATCTCGCCCGCTCGGCCAACCTGACGCCGCAGGCCGTGGCGGGCATCGTCGCGGCGCTGGAGGAGGCCGGGCTGGCCGAGCCGCGCGGCAAGCGCGCCGGGCAGATCGGCCAGCCCTCCACCATCTATGCCGTGGCGCCGGACGGAGCTCTCTCGATCGGGCTGCATGTCGGCCGCCGGGCCCTCGACGCCGTGCTGATCGACCTCGCCGGCCGGACCCGCCGGGTCGAGACCTCCGAATATGCCTATCCCGAGCCGCAGGCCGTGGCGGACCTCGCCGCCGCCTATGTCCGCACCCTGCATTCGAGCCTGGCGCCGGAGCTGCGCCGGCGCGTCGTCGGCGTCGGGGTGGCCATGCCCTATTTCCTCGGCGGCTGGCGCAACGAGCTCGACCTGCCGCTGCGGGTGACGGCGGCCTGGGAGGAGTTCGACCTGCGGGCGCGGTTGGCGGAGGAGACCGACCTGCCCCTGCACTTCCAGAACGACGCTTCCTCCGCCGCCACGGCCGAGCTGGTCTACGGCCACGGCCAGACCGTCCGCGACTTCATCCACTTCTCCGTCCACACCTTCATCGGCGGCGGCCTGATCATCGACGGCAAGCTGGAGACCGGGCCGCACGGCAATTCCGCCGCCTTCGGCCCCTACCCCGTCGGGCCCTCGCGGCTCTCGACGGTGCCGCCGCCCGCCGGCCCCTTCGAGATCCTGCTGCGCCGGGCCTCGATCTACGTGCTGACCCACCATCTGCGCGCCAATGGCGTGCCGATCAACCGGGCCTACGAACTCGAGGCCCTCGGCGAGCGGGCCGAGCCCTATCTCTCCGAATGGATCGCCGACTGCGCCGACGCCCTGGCCACCGCCATCGTCGGCGCGATCGCCGTGGTCGATGTCTCCGCCGTCGTCATCGACGGCATCCTGCCCCGTGCGATCCTGGAGCGCACGGTCGAGGCCATCCGGGAGCGCTTCGAGGCGATCGTGCCGGAGGGGCTGGTCGTCCCGGCGATCCGGGCGGGCAGCATCGGCAGTCAGGCGGCGGCGATCGGGGCCGCCATCATCCCGCTCTACGCCATGTTCGCGCCCGACAGCGACGTCCTGGTCAAGACGCAGCCCGAGCCGCGGCGCCCGACCCGGCACCAGGGCGCCGCCTCCGCCTTCGCCGGCCCGCGCAGCTTCCGCTGA
PROTEIN sequence
Length: 424
MSRKGSNSVQIRHYNERVVLEALRRMGEASKADLARSANLTPQAVAGIVAALEEAGLAEPRGKRAGQIGQPSTIYAVAPDGALSIGLHVGRRALDAVLIDLAGRTRRVETSEYAYPEPQAVADLAAAYVRTLHSSLAPELRRRVVGVGVAMPYFLGGWRNELDLPLRVTAAWEEFDLRARLAEETDLPLHFQNDASSAATAELVYGHGQTVRDFIHFSVHTFIGGGLIIDGKLETGPHGNSAAFGPYPVGPSRLSTVPPPAGPFEILLRRASIYVLTHHLRANGVPINRAYELEALGERAEPYLSEWIADCADALATAIVGAIAVVDVSAVVIDGILPRAILERTVEAIRERFEAIVPEGLVVPAIRAGSIGSQAAAIGAAIIPLYAMFAPDSDVLVKTQPEPRRPTRHQGAASAFAGPRSFR*