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berkeley_reactor_200306_biofilm_scaffold_34479_83

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(101002..101619)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000300378B similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 204.0
  • Bit_score: 292
  • Evalue 3.30e-76
lysine transporter LysE similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 205.0
  • Bit_score: 275
  • Evalue 9.10e-72
Lysine transporter LysE {ECO:0000313|EMBL:AJC17412.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 205.0
  • Bit_score: 275
  • Evalue 4.50e-71

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Taxonomy

Pandoraea sputorum → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGCTCGATCCCACCGCAATCCTGATCTTCGCCGGCGCGCTGTTCGTCGCGGCGGCCTCGCCGGGCCCGGGCATCGCCGCCATCGTGGCGCGCGTGCTCGGCCGCGGCACCGACGGCTCCGTCGCCTTCACGGCCGGTGTCGCCATCGGCGACGTGGTGTGGCTGACCTTGGCGGTGACCGGCCTCGCCGTGCTGGCGCAGACCTTCCAGGCGGTGTTCGTCGCCGTGAAATATGCCGGCGCCGCCTATCTCCTCTTCCTCGCCTGGAAATTGTGGACCGCGCCGGCCGCAGCACGCGACATCGCCGCCACGACCACGCGGGAATGCCAGGCGCGGCTGTTCCTCGGCGGCCTTGCCGTCACCATGGGCAACCCGAAGGTGATGGTGTTCTATCTGGCGCTGCTGCCCAACCTCATCGACCTGCGCGCCATCCAGCCGGCCGGCTATGCCGAGCTCGTCGGCGTGGTGCTGTCGGTGCTGACCCTGGTGTTCTCCGGCTACATCATGCTGGCGGCGCGGGCGCGGCGGCTGTTCACCTCCGCCCGCGCCATGAAGACCATCAACCGCACGACCGGCGCGGTCATGGCCGGCGCCGCGGTGGCCATCGCCACGCGGTGA
PROTEIN sequence
Length: 206
VLDPTAILIFAGALFVAAASPGPGIAAIVARVLGRGTDGSVAFTAGVAIGDVVWLTLAVTGLAVLAQTFQAVFVAVKYAGAAYLLFLAWKLWTAPAAARDIAATTTRECQARLFLGGLAVTMGNPKVMVFYLALLPNLIDLRAIQPAGYAELVGVVLSVLTLVFSGYIMLAARARRLFTSARAMKTINRTTGAVMAGAAVAIATR*