ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_34479_115

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 129439..130941

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000374D1A1 similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 492.0
  • Bit_score: 196
  • Evalue 6.00e-47
Putative diguanylate cyclase YedQ {ECO:0000313|EMBL:CEJ09780.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 490.0
  • Bit_score: 283
  • Evalue 4.00e-73
PAS/PAC sensor-containing diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 261.0
  • Bit_score: 151
  • Evalue 3.70e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 1503
ATGTACTTCGAGTTCCGCGAGACCGACATCGACCGGCACATCCAGACCGCGGATGCCGGAGCGCTGCTGTCGGTCTGGCGCCGGCATGCCGGTGCGGGCGGCCTGCCCGAGGCCGATGCGGTCTGGGCGGAGGGCGTCGCGCGGCTCGAGCCCTATCTCCTGTGGGTGGAGCCGGCCGGCGAGGACGACTGGCACTATGCCGTCGTCGGCTCGCGCCTTGCCGAGGAGCGTGGGCTGCACTGGCGCCATCCCCATGTCAGCGGCCTCGCCGAGCCCTCCCGCTCGTTCGTCCGGCGCTGCTTTGCCACCGTCGTCCGGCGCGCCGAGCCCGCCTATGCCATCCACACCGCGCCGGAATGCGAGAAAGTTCTGCTGTGGGAGCGGCTGGTGTTGCCCTGCCGGGGCCGCGGTGGCGGCATCTGCCTCCTCGTCTTCCTGCGTCCGCTCGAATATGTCGAGGACATGATCCGCACGGTGCTGGACTCGACCCCGGGCGGCATCCTGCGGGCCCGCTGCATCCGCGACGCCGAAGGCCGCATCGTCGACGCCGTGTGTCTGCTCGCCAACGAGCGGGCTGCCGCGCTGCTGCGCCGCCCGCCCGGCGAGCTGGTCAAGGGCTGCCTGCTCGAGCTCTTCCCGCATTTCCTCGAATCGGGCGTGTTCGCGCGCCTCGCCGGCCTGGTGGAGACGCGCCAGCCCTGCAGCTTCGAGATGGAGTATCGCGACAGCGGCGCCCTGGCCTGGTTCTCCGTGTCGGCGGCGCCGCTCGGCGACGGCTTCACCCTGTCGCTCACCGACGTCACCGCCCTGAAGCGGGTCAACCTCGAGCTCGAGCGTGCCCGCACCGAGCTGATCGCGATGAACGGCCATCTCGAGCGCCAGGCCCTGGACCTGGAAGCCGCCATCGCCGACGCCAATGCGGCGCGGCACGACCTCGAGGCGGAGGTCGAGTGCCGCAAGGTGCTGGAGGAGGAGCTGCGGCGCCTCGCCATGACCGATACGCTCACCGGCCTCGCCAACCGCCCGGCCCTCATCGCCCATGGCCAGGCGCTCGTCGCCGGCGTCGCCCGGCGCGGCCAGCCGCTGTCGGTGATCGCCATCGACATCGACCGTTTCAAGGACATCAACGACACCCACGGCCACGCCGCCGGCGATTGCGTGCTGGCGGCGCTCGCCATGCTCCTGCAGGACGCGGCTCCCCCGGACCTCGGCATGGCCGGGCGCCTCGGCGGCGAGGAGTTCGTCATCGTCGTGCCGCGCGTCGGCATCGAGGCGGCGGCCAGGGTGGCCGAGGGCCTGCGCGCCGCCCTCGCCGCCCGGCCGATCGACGCGGGCACGGCCGGGATCGCCGTCACCGCCAGCTTCGGCGTGGCGCAGTTCATCGCCGGCGAGGAGTTCGAGGACATGCTGGCGCGCTGCGACGAGGCGCTCTACCGCGCCAAGCGCCAGGGCCGCAACCGCGTGGTTCGTGCGGCCATGCCCCGGCGCCGCGCCGTGGCCTAA
PROTEIN sequence
Length: 501
MYFEFRETDIDRHIQTADAGALLSVWRRHAGAGGLPEADAVWAEGVARLEPYLLWVEPAGEDDWHYAVVGSRLAEERGLHWRHPHVSGLAEPSRSFVRRCFATVVRRAEPAYAIHTAPECEKVLLWERLVLPCRGRGGGICLLVFLRPLEYVEDMIRTVLDSTPGGILRARCIRDAEGRIVDAVCLLANERAAALLRRPPGELVKGCLLELFPHFLESGVFARLAGLVETRQPCSFEMEYRDSGALAWFSVSAAPLGDGFTLSLTDVTALKRVNLELERARTELIAMNGHLERQALDLEAAIADANAARHDLEAEVECRKVLEEELRRLAMTDTLTGLANRPALIAHGQALVAGVARRGQPLSVIAIDIDRFKDINDTHGHAAGDCVLAALAMLLQDAAPPDLGMAGRLGGEEFVIVVPRVGIEAAARVAEGLRAALAARPIDAGTAGIAVTASFGVAQFIAGEEFEDMLARCDEALYRAKRQGRNRVVRAAMPRRRAVA*