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berkeley_reactor_200306_biofilm_scaffold_34479_116

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(131074..132261)

Top 3 Functional Annotations

Value Algorithm Source
Putative peptidoglycan-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJE4_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 401.0
  • Bit_score: 516
  • Evalue 1.60e-143
peptidoglycan-binding protein similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 401.0
  • Bit_score: 516
  • Evalue 4.50e-144
Putative peptidoglycan-binding protein {ECO:0000313|EMBL:CAP42205.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 401.0
  • Bit_score: 516
  • Evalue 2.20e-143

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGATCAAGCCCTTCGCCCTCGCCATTGCCCTCCTCGCCGCGGCCTCGGCGCCGGCGGCCGCCCAGAGCTTCGACGGCTGCCTTGCCGGCCTGCGCGCCCAGTCCGCTGCGGCCGGCATCTCGGCCGCCGTGTTCGACGCCCAGACCCGCGGACTGCAGCCGGACATGAGCGTCATCGACCTCATGAACAAGCAGCCGGAGTTCAAGACGCCGATCTGGGACTACATGGCGAGCCTGGTCGACGACGAGCGCATTGCCGACGGGCGGCGCATGCTGGCCAAATGGGCCAATGTGCTGAACGCGGCGCAGCGCCGCTACGGCGTCGACCCGGCCGTGGTGGTGGCGGTGTGGGGCGTCGAATCCAATTACGGCCAGAAGGGCGGCGACCGGCCGCTGGTGCGCTCGCTGGCGACGCTGTCCTGCTACGGCGGACGACGGGCGGGCTACTTCCGCAGCGAATTCTTCGCCACGCTGAAGATCATCCAGCGCGGCGACGTCGATCCCGCCCATCTCGTCGGCTCCTGGGCCGGCGCCTTCGGCCATACGCAGTTCATGCCCTCGACCTTCCTGCGCATCGCCGTGGACGCCGACGGCGACGGCCGGCGCGACATCGTCGATTCCGTGCCCGACGCCCTCGCCTCCACCGCCAATTATCTCGCCAAGTCCGGCTGGGCCAGCGGCGGGCGCTGGGGCTTCGAGGTGGCGCTGCCGGCCAAGTTCAACGCGGGCCTCGCCGGCCGAAGCCGCAAACGCGCGCTCTCGGCCTGGGTCGCTGCCGGGGTGACGCGCGTCGACGGCTCGGCCCTGCCCAAGGGCGACCAGCGTGCCGGCATCCTGCTGCCGGCCGGCCCGCGCGGCCCGGCCTTCCTGGTGTTCAAGAATTTCGACGTGATCTATTCCTACAACGCCGCCGAATCCTACGCGCTGGCGATCGCGCATCTCTCCGACCGCATCCGCGGCGGCGGGCCGATCGTCACGCCCTGGCCGACCGACGATCCCGGCCTGTCGCGGGCCGAGCGCCGCGAGCTGCAGACGCTGCTCGCCCAGCGCGGCTACGACGTCGGCACGCCCGACGGGGCGATCGGCGACAAGACCCGCACCGCGGTGATGGACGTGGAGCGGCGCCTGGGCTGGCCCCAGACCGGCCGGGCCGGCATGAAGATCCTGGTGGCGCTGCGCAAGCAATAG
PROTEIN sequence
Length: 396
MIKPFALAIALLAAASAPAAAQSFDGCLAGLRAQSAAAGISAAVFDAQTRGLQPDMSVIDLMNKQPEFKTPIWDYMASLVDDERIADGRRMLAKWANVLNAAQRRYGVDPAVVVAVWGVESNYGQKGGDRPLVRSLATLSCYGGRRAGYFRSEFFATLKIIQRGDVDPAHLVGSWAGAFGHTQFMPSTFLRIAVDADGDGRRDIVDSVPDALASTANYLAKSGWASGGRWGFEVALPAKFNAGLAGRSRKRALSAWVAAGVTRVDGSALPKGDQRAGILLPAGPRGPAFLVFKNFDVIYSYNAAESYALAIAHLSDRIRGGGPIVTPWPTDDPGLSRAERRELQTLLAQRGYDVGTPDGAIGDKTRTAVMDVERRLGWPQTGRAGMKILVALRKQ*