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berkeley_reactor_200306_biofilm_scaffold_44015_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3741..4445

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F71D98 similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 234.0
  • Bit_score: 416
  • Evalue 1.00e-113
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 234.0
  • Bit_score: 416
  • Evalue 1.40e-113
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 234.0
  • Bit_score: 414
  • Evalue 1.40e-113

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGGGTCAGAAGATCAATCCGATCGGCCTGCGTCTCGGCATCAACCGGACCTGGGACTCGCGCTGGTTCGCCGGCAAGAACGAGTACGGCCAGCTTCTCCATGAGGACATCGCCATCCGCACGGCGCTGATGAAGCAGCTCAAGCAGGCGGCGGTGTCGAAGATCGTCATCGAGCGTCCGCACAGGAAGTGCCGCGTCACCATCCAGTCGGCGCGCCCGGGCATCGTGATCGGCAAGAAGGGCGCCGATATCGACAAGCTCAAGAAGATCGTGTCGAAGATCACCTCCTCGGAGGTGCACATCAACATCGTCGAGGTGCGCAAGCCCGAGATCGACGCCACCCTGGTGGCGGAATCGATCGCCCAGCAGCTCGAGCGTCGCGTCGCCTTCCGTCGTGCCATGAAGCGCGCCGTGCAGTCGGCCATGCGCCTGGGTGCCGAAGGCATCCGCATCAACTGCTCGGGGCGCCTGGGCGGCGCCGAGATCGCGCGCCTGGAATGGTATCGCGAGGGCCGGGTGCCGCTGCACACGCTGCGCGCCGACGTCGATTACGGCACGGCGACTGCCTTCACCACCTTCGGCACCTGCGGCATCAAGGTCTGGATCTTCAAGGGCGAAATCCTTGAGCACGATCCGATGGCCCAGGACAAGCGCATGGCGGAGGCCGAGGGCGGCCGCTCGTCGTCGCGCCGCGGCGAGGCGTGA
PROTEIN sequence
Length: 235
MGQKINPIGLRLGINRTWDSRWFAGKNEYGQLLHEDIAIRTALMKQLKQAAVSKIVIERPHRKCRVTIQSARPGIVIGKKGADIDKLKKIVSKITSSEVHINIVEVRKPEIDATLVAESIAQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRADVDYGTATAFTTFGTCGIKVWIFKGEILEHDPMAQDKRMAEAEGGRSSSRRGEA*