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berkeley_reactor_200306_biofilm_scaffold_44015_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5615..5983

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L14 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWB7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 122.0
  • Bit_score: 232
  • Evalue 1.90e-58
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 122.0
  • Bit_score: 232
  • Evalue 2.60e-58
rplN; 50S ribosomal protein L14 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 122.0
  • Bit_score: 231
  • Evalue 6.90e-59

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGATTCAGATGCAGTCGAATCTCGACGTCGCGGACAATTCCGGCGCGCGTCGTGTGATGTGCATCAAGGTTCTCGGCGGCTCGAAGCGGAAATATGCTTCCGTGGGCGACGTCATCGTCGTCTCGATCAAGGAAGCCATTCCGCGCGGGCGCGTCAAGAAAGGCGATGTGATGAAGGCCGTCGTGGTGCGCACGGCCAAGGACATCCGCCGTCCCGACGGTTCGGTGATTCGCTTCGACCGCAACGCGGCCGTGCTGATCAACAACCAGAAGGAGCCGGTCGGCACGCGTATCTTCGGACCGGTTCCGCGCGAGTTGCGCGCCAAGAACCACATGAAGATCATTTCGCTTGCGCCGGAGGTGCTGTGA
PROTEIN sequence
Length: 123
MIQMQSNLDVADNSGARRVMCIKVLGGSKRKYASVGDVIVVSIKEAIPRGRVKKGDVMKAVVVRTAKDIRRPDGSVIRFDRNAAVLINNQKEPVGTRIFGPVPRELRAKNHMKIISLAPEVL*