ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_44015_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 6293..6850

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A965_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 185.0
  • Bit_score: 322
  • Evalue 1.60e-85
50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 185.0
  • Bit_score: 322
  • Evalue 4.50e-86
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 185.0
  • Bit_score: 322
  • Evalue 2.20e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCCTGAGGCGACCTACACGCCGCGCATGAAGGCGTATTACGCCGATGTGGTGCGGCCCAAGCTGATCGAGCAGTTCGGCTACAAGAACCCCATGGAAGTGCCGACGATCGACAAGATCGTCCTCAACATGGGCGTGGGCGAAGCCACCGGCGATTCCAAGAAGGCCTCGGTCGCCGCCGGCGATCTGGCTCTGATCGCCGGCCAGAAGCCGGTGGTGACGCGGGCCCGCAAGGCCATCGCGCAGTTCAAGGTGCGCGAGAACATGCCGATCGGCGCGAAGGTCACCCTTCGCAAGATGCGGATGTTCGAGTTCCTCGATCGCCTCGTGACCGTCGCGCTCCCCCGGGTTCGCGACTTCCGCGGGCTGAACCCGAAGAGCTTCGACGGGCGCGGCAACTACGCGCTCGGTCTCAAGGAACACATCATTTTCCCTGAGATCAACTACGACAAGGTCGACCAGGTCTGGGGCATGGACATCATCGTGTGCACCACGGCCAAGACCGACGAGGAGGCTCGCGCTCTCCTCAAGTTGATGAATTTCCCCTTCCGGCAGTGA
PROTEIN sequence
Length: 186
MPEATYTPRMKAYYADVVRPKLIEQFGYKNPMEVPTIDKIVLNMGVGEATGDSKKASVAAGDLALIAGQKPVVTRARKAIAQFKVRENMPIGAKVTLRKMRMFEFLDRLVTVALPRVRDFRGLNPKSFDGRGNYALGLKEHIIFPEINYDKVDQVWGMDIIVCTTAKTDEEARALLKLMNFPFRQ*