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berkeley_reactor_200306_biofilm_scaffold_44015_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9120..9311

Top 3 Functional Annotations

Value Algorithm Source
LSU ribosomal protein L30p (L7e) n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RTW3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 65.0
  • Bit_score: 102
  • Evalue 1.50e-19
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 65.0
  • Bit_score: 102
  • Evalue 2.10e-19
rpmD; ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 59.0
  • Bit_score: 99
  • Evalue 3.60e-19

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Taxonomy

Lutibaculum baratangense → Lutibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
ATGGCGAAGACCAAGACCGTCACCGTCGAGCAGATCGGCAGCCCGATCCGCCGCACCCAGGACCAGCGCGCCACGCTCGTCGGCCTCGGGCTCAACAAGATCCGCCGCCGCTCGACGCTGGAAGACACGCCCGCCGTGCGCGGCATGATCGCCAAGCTCGGGCACCTCGTCCGCGTGGTCGAGGCCGAGTAA
PROTEIN sequence
Length: 64
MAKTKTVTVEQIGSPIRRTQDQRATLVGLGLNKIRRRSTLEDTPAVRGMIAKLGHLVRVVEAE*