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berkeley_reactor_200306_biofilm_scaffold_44015_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 15390..16433

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI00037A6EB3 similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 341.0
  • Bit_score: 481
  • Evalue 6.50e-133
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31643.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 338.0
  • Bit_score: 486
  • Evalue 1.70e-134
periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 337.0
  • Bit_score: 469
  • Evalue 4.30e-130

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGCCCAATCCAGTCCATGCCCTGTCGCGCCGGCTCGCGCCGGTCCTCATCGCCGGCCTCGCCTGGCTCGCGCCCGGCCCGGCGCCGGCCGCCGAAGCGACCCATTATCCCCTGACCATCCGCAATTGCGGCGCGGACGTCACCTTCGACAAGGCGCCGGGCCGGGCCGTTTCGATCGGCCAGAGCAGCACCGAGATCCTGCTGTCCCTCGGCCTCGCCGACAAGATCGTCGGCACGGCGGTCTGGGTCGGCCCGGTCCTCAAGGGGCACGAGGCCGAGAATGCCCGGATCAAGCGCCTGGCGGACAACAGCCCGAGCTTCGAATCCGTCGTCGGCCAGGAGCCGGACCTGGTGACGGTGCAGTTCGAGTGGGACGTCGGGCCGAACGGGGCGGTGGGCAAGCGCGACCAGTTCTCGGCGCTGAAGATCCCGACCTACATCTCGCCCTCCGACTGCGTCGAGAAGGACAATTCCGGCGGCGGCGACGGCGTCCGCAAGCAGATGTTCACGATGGACCTGGTCTATCAGGAGATCCGCGAGCTCGCCGAGATCTTCGACGTGAACCAGCGGGGCGAAGCGCTGATCGCGGACCTCAGCCGGCGCGAGGCCGAGGCGATCGCCGAGGTCGCCGACGTGAAGGCCAAGGACGTGCCGGTGGTGTTCTGGTTCTCCAGCAAGGAGGTGCAGGGCGATGCCTTCGTCGCCGGCAAGAACGGGGCGCCCGCCTATATCCTGAAGACCCTCGGCGCCAGGAACGTCATCACCACTGACGAGGAGTGGCCGCTGGCGAGCTGGGAGAGCATCGTCGCGACCAACCCGGCGGTGATCGTCATTGCGCAGATGGACCGCCGCCGCTACGCCGCCGACGATCCGGCGGTGAAGGCGAAGTTCCTGGAGACCGACCCCGTCACCAGCAAGCTCGACGCCGTGCGCAACCGGCGCTTCGTGATGATGGACGCCCAGGCGATGAATCCGACGATCCGCACCATCGACGGCATCGAGGCGCTGGCCAAGGGCATCAAGAGCGCCGGGCTCGCCGATTGA
PROTEIN sequence
Length: 348
MPNPVHALSRRLAPVLIAGLAWLAPGPAPAAEATHYPLTIRNCGADVTFDKAPGRAVSIGQSSTEILLSLGLADKIVGTAVWVGPVLKGHEAENARIKRLADNSPSFESVVGQEPDLVTVQFEWDVGPNGAVGKRDQFSALKIPTYISPSDCVEKDNSGGGDGVRKQMFTMDLVYQEIRELAEIFDVNQRGEALIADLSRREAEAIAEVADVKAKDVPVVFWFSSKEVQGDAFVAGKNGAPAYILKTLGARNVITTDEEWPLASWESIVATNPAVIVIAQMDRRRYAADDPAVKAKFLETDPVTSKLDAVRNRRFVMMDAQAMNPTIRTIDGIEALAKGIKSAGLAD*