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berkeley_reactor_200306_biofilm_scaffold_48742_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1297..2070)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XSN9_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 257.0
  • Bit_score: 387
  • Evalue 5.60e-105
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 257.0
  • Bit_score: 387
  • Evalue 1.60e-105
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDN94914.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 257.0
  • Bit_score: 387
  • Evalue 7.80e-105

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
GTGTATCTCGACAAGTACAGGCTCGAGGGCCAGACGGCCTTCATCACCGGCGGCGGCCGCGGCATCGGCCTCGCCACGGCCGAGGCCCTGCTGGAAGCCGGGGCCAAGGTGATCATCTCCGACCACAGCCAGGCCCTGCTCGACAGCGGCCGGGCCGCGATCGCCGCATCGGGGCGCAGCGTCGAGACCATGCTGCTCGACGTGACCCGGCCCGAGGACGTGGCGCGCGTCGCGGCCGAGGCCAATGACCGCCACGGACCGGTCGACATCCTCGTCGCCAATGCCGGCATCGCCTGGCCGGACACGCCGGGCGAGGCGATCCCCGACGAGGTCTGGCTCAAGATCATCGATGTCGACCTCAACGGCGTCTACTGGTCCTGCCGCGAGTTCGCCAAGCCGATGCTGGAGCGCGGCCGCGGCGCCATCGTGACGCTCGGCTCGATGTCCGGCCTGATCTCGAACAAGCCGCAGCGTCAGGCCCATTACAACGCCGCCAAGGCCGGCGTGCACCACCTCACCAAGTCGCTCGGCGGCGAATGGGCCGAGCGCGGCGTGCGCGTCAACTGCGTGGCGCCGACCTATGTCGACACGCCGATGTCGAGCGGCAGCTTCAACGACCCCGCCCGCTTCCCGACCTGGATGGAGTTCACGCCGATGAAGCGGGTGGCGCGCCCCGACGAGATCGCCTCCGCCATCCTGTTTCTGGCCACCGACGCCTCCAGCGCCATGACCGGGACGACGGTCGTGGTGGATTGCGGCTACACCATCTGGTGA
PROTEIN sequence
Length: 258
VYLDKYRLEGQTAFITGGGRGIGLATAEALLEAGAKVIISDHSQALLDSGRAAIAASGRSVETMLLDVTRPEDVARVAAEANDRHGPVDILVANAGIAWPDTPGEAIPDEVWLKIIDVDLNGVYWSCREFAKPMLERGRGAIVTLGSMSGLISNKPQRQAHYNAAKAGVHHLTKSLGGEWAERGVRVNCVAPTYVDTPMSSGSFNDPARFPTWMEFTPMKRVARPDEIASAILFLATDASSAMTGTTVVVDCGYTIW*