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berkeley_reactor_200306_biofilm_scaffold_48742_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(15571..16974)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEBEA9 related cluster n=1 Tax=unknown RepID=UPI0003CEBEA9 similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 451.0
  • Bit_score: 410
  • Evalue 1.50e-111
ROK family transcriptional regulator {ECO:0000313|EMBL:ESY71784.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 451.0
  • Bit_score: 410
  • Evalue 2.00e-111
transcriptional regulator/sugar kinase similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 417.0
  • Bit_score: 364
  • Evalue 3.40e-98

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGAGGGGCGCCAAGCCTTCGGAGCCGGCGGTGGCCGAGCGCCCCATCGATTCGGAGAGGCACAGCCTGCTGGCGGTGTTCGACCTGATCCGCACCGGCCGCGCCGCCACACGCCTGGAACTGGAGCTGGCCTCGGGCCTCGGGCGCGCCGTGGTGACGGACCGCCTGGCGACGCTGACCCAGCTCGGACTGATCGAGGAGGGCGAGCGCCGCCCCTCGATGGGCGGCCGGGCGCCGCGCACGGTGCGCCTGCGCGCCGATGCCGGCGGCATCCTCGTCGCCAATCTCGACCGCTCGACCCTGGATGTCGGGCTCGCCGACCTCACCGGCCGGGTGCTGTTCGACCCTCACGAGCCGGCCGACCGCGCGGCCGGGCCGGAGCCCCTCCTCGCCCGCCTGCATGCGCTGTTCGATTGGGTGCTGGAGCAGCAGGACCAGCAGCGTGCGTTGTGGGGCATCGGCATCGGCGTTCCCGGCGCCGTCGAGACACCGTCCGGCCCGGCCATGACGCTGGAGCGCCTGACCTTTGCCCCGTCCTGGGCCTCCTATCCCGCGGTCGAAGCGCTGGTGGCACGGCACCGGGCCCCGGTCTGGGTCCGCAGCTCGATCCAGATGGCCACCATGGGCGAGTTCGGGCCGCCGGACCCGGCGCGGCCGCGCGACGTGCTGTTCGTCGAGCTCGGCGAGGAGATCAGCGCCGGCATCGTCTCGGAGGGACGCCTGCACCGCGGCGCGCAGGGCATTGCCGGCCAGATCGGCCACATTCCCGTGGGAGAGGGCAGCGACCTCGTCTGCCATTGCGGCAACCGCGGATGCCTGGAGACGCTGGCCGCGAGCGAAGCGGTGCGGCGCGCGGCCGAGGCCGCAGCCCGCGACGGCCGCAGCCGGCGCCTGGCCGAGGCGGTGGCCCGCGGCACGATCACGGTGCCGGAGATCGGCCTCGCCGCCCAGCTCGGCGATGCGGCGGCAGCGCAGATCCTGGCGCGGTGCGGCCGCCTGATCGGCACCACCCTCGCCGCCCTGACCAATGCCCTCAACCCCTCGAGCATCGTGCTCGGCGGCGAGCTGACGCAGACCGGCGACATCCTGCTCGCCGCGGTGCGCGAGGCGGTCTACCGCAACTCGCACCCGCTGGCGACGCGGGACCTCGCCATCGTGCGCTCCACCATGGGCCGCTCGGCCGCGCTCGCCGGCGCCGCGCTGATCGCCGTGGACGAACTGTTCGGGCCCGATATGCTGGCGGCCTGGGTCGGCCGGGGCACGCCGATGCTGCATCCCGACCTGCCTGCGCTGATCGCCGAGGCCCAGGCCCGGCTGCGCGAGCCGGCGGCGGCAGCGCCGGCCCGGCCGCCGGCGCCGGACGACCGGCATGCGGCCCCATCGCGGCCGGGGAGGCAGAGATGA
PROTEIN sequence
Length: 468
MRGAKPSEPAVAERPIDSERHSLLAVFDLIRTGRAATRLELELASGLGRAVVTDRLATLTQLGLIEEGERRPSMGGRAPRTVRLRADAGGILVANLDRSTLDVGLADLTGRVLFDPHEPADRAAGPEPLLARLHALFDWVLEQQDQQRALWGIGIGVPGAVETPSGPAMTLERLTFAPSWASYPAVEALVARHRAPVWVRSSIQMATMGEFGPPDPARPRDVLFVELGEEISAGIVSEGRLHRGAQGIAGQIGHIPVGEGSDLVCHCGNRGCLETLAASEAVRRAAEAAARDGRSRRLAEAVARGTITVPEIGLAAQLGDAAAAQILARCGRLIGTTLAALTNALNPSSIVLGGELTQTGDILLAAVREAVYRNSHPLATRDLAIVRSTMGRSAALAGAALIAVDELFGPDMLAAWVGRGTPMLHPDLPALIAEAQARLREPAAAAPARPPAPDDRHAAPSRPGRQR*