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berkeley_reactor_200306_biofilm_scaffold_48742_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 17897..19570

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003797BFF similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 546.0
  • Bit_score: 922
  • Evalue 1.40e-265
Gluconate dehydrogenase {ECO:0000313|EMBL:ESW60328.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 559.0
  • Bit_score: 625
  • Evalue 4.80e-176
glucose-methanol-choline oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 543.0
  • Bit_score: 602
  • Evalue 8.80e-170

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Taxonomy

Rhodobacter sp. CACIA14H1 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
ATGGCGCGTAAGCCCAGGCCCGACCGCGCCGAGGTCTGCATCATCGGCGCCGGCGCTTCCGGCGCCACCGCGGCCAAGGTGCTGACCGAGGCCGGCGTGCGCGTCGTGGCGCTCGAGCGCGGGCCCTGGCGCCGGCGCGAGAGCTTCGGCGGGGACGAGCTCGCCAACATCAACCGCTACAATCTCTGGCCGGATCCGCTGCTCAACCCGCGTACCGCCCGCACCTCGGCGGCCGAGCCGGCGCGCGAGGAGCTGTTCTGCCCGGTGCCGCAGATGGTCGGCGGCGGCACCGTGCACTGGCAGGGCTGGCTGCCGCGCTTCACGCCCAACGATTTTCGCCTGCGCACCATCGCCGGCCCGCTGGAGGGGGCGAGCCTGGCCGACTGGCCGATCGGCTATGACGAGCTCGAACCCTACTACGACAGGGTCGAATGGGCGTTCGGCGTCTCGGGCCTGGCCGGCGCCAACCGTTTCGAGGGGCCGCGCAGCCGGGGCTACCCGTGCCCGCCGATGCCGATGTCGCGCTATGCCGAAAACTTCCACAGGGGCTGCGCGGCGCTCGGCTGGAACTCCTTCCCCACGCCGCAGGCGGCTCTCTCGCGCCCGTTCGGCGGCCGCCCGGCCACCGTCGTCAGCGCCTTCGCCCAGCAGCACGGCGACCCCACCGGCACCCGCTCCAGCGCCCTCAACGTCTTCGTGCCGCAGGCCGCCGCCACCGGCCGCTATGATCTCAGGCCGGACTGCTACGTCCGCGAGCTCGTTCTCGACGCCGAGGGGCGGCTGCGCAGCGCCGTCTACGAGGACGCGGACGGCGACCTCGTCGAGCAGGAGGCGGACCTGTTCCTGCTCGCCTGCGGCGCGGTCGAGAGCGCGCGGCTCCTGCTGCTGTCGCGCTCCGGCCGCTTTCCCGCCGGCCTCGCCAACGGCAGCGATCTCGTCGGGCGCAACGTCACCTTCCACGAATACAGCGCCGCGATCGGCTTGTTCGACGACCCAGTCTACGCCTGGGCGGGCGGCGGCTATGTCAGCGCCTCCAGCTTCCAGTTCTACGAGCACGACGAACGCCGCGGCTTCGTCAGCGGCGGTCATGTCGCGGCGGCCGGGGTCGGCATTCCCCTGCCGATCAACTGGCGCCTGCCGGGCGCGCCCGCCTGGGGCGCCGAGGCCAAGCGCGTCGATCGCGAGGCGTTCAACCATTCCATGGCGGTCGCCATGGTGCTGCACGACATGCCGCAGCACGACAACCGTGTCGACCTCGACGACGGCATGGTCGACGCCTGGGGCCTGCCGGTCGCCCGCATCACCCTGACGCCGCACCGCAACGACCTCGACCAGGGCCGCTTCCTGATCGATCGCAGCGCCGAGATCCTCGAAGCGGGTGGGGCGCGGAGCGTCACCAAGGTCTATGCCGAGCGCGTCACCGGCAACTGCTCGCACCAGCACGGCACCGCCCGCATGGGCGATGATCCCGCCGCCTCGGTGCTGAACCGCTGGTGCCAGGCCCACGAGGTCGACAACCTCTTCGTCATCGACGGCTCGTCCTTCCCGACCGGGACGGGCGCCAATCCCACCCTCACCATCATGGCCAATGCCTGGCGCGTCTGCGACCACATCCTCGCCAACCGGGGACGGTTCGCGCGCGCCGGCCTGGCCGCTTCGGGAGCAAGCCGATGA
PROTEIN sequence
Length: 558
MARKPRPDRAEVCIIGAGASGATAAKVLTEAGVRVVALERGPWRRRESFGGDELANINRYNLWPDPLLNPRTARTSAAEPAREELFCPVPQMVGGGTVHWQGWLPRFTPNDFRLRTIAGPLEGASLADWPIGYDELEPYYDRVEWAFGVSGLAGANRFEGPRSRGYPCPPMPMSRYAENFHRGCAALGWNSFPTPQAALSRPFGGRPATVVSAFAQQHGDPTGTRSSALNVFVPQAAATGRYDLRPDCYVRELVLDAEGRLRSAVYEDADGDLVEQEADLFLLACGAVESARLLLLSRSGRFPAGLANGSDLVGRNVTFHEYSAAIGLFDDPVYAWAGGGYVSASSFQFYEHDERRGFVSGGHVAAAGVGIPLPINWRLPGAPAWGAEAKRVDREAFNHSMAVAMVLHDMPQHDNRVDLDDGMVDAWGLPVARITLTPHRNDLDQGRFLIDRSAEILEAGGARSVTKVYAERVTGNCSHQHGTARMGDDPAASVLNRWCQAHEVDNLFVIDGSSFPTGTGANPTLTIMANAWRVCDHILANRGRFARAGLAASGASR*