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berkeley_reactor_200306_biofilm_scaffold_48742_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 21638..23221

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003650397 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 518.0
  • Bit_score: 676
  • Evalue 1.60e-191
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:GAD57262.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 516.0
  • Bit_score: 625
  • Evalue 6.00e-176
sugar ABC transporter, ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 512.0
  • Bit_score: 607
  • Evalue 2.60e-171

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Taxonomy

Loktanella cinnabarina → Loktanella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1584
ATGAGCGACACCGAGAGCGGCACGGTCGCGGCTTCCGATGCGAGCCTCGCCGTGCGCATGGCCGGCGTGTCCAAGCAGTTCGGCGGCGTGCGCGCGCTGGAGAGCGTCGACTTCGCCGTCCGCTTCGGCGAGATCCATGCGCTGCTGGGCGAGAACGGCGCGGGGAAGTCGACGATCCTCAAGATCCTGAGCGGCGTCCAGGCTCCCTCGGCCGGCACGGTGGAGATCGCCGGCTTGGCCGTGACCGACTTCACGCCCCGGGCGGCGCAGGCCGCCGGCGTGACCATGATCTTCCAGGAGACCAGCCTGGTGCCGACGCTCACCGTCGCGCAGAACATCTTCCTGACGCGGGAGGTCAAGGTCCACGGCCTGATCGACGACCGGGCGGCGGCGGCCAAGGCCCGGGACCTGTTCGCCGAGCTCGGCGTCGACATCGACCCGAACGCCGCGGTCGGCGAGCTCGGAGCCGGGCAGCGCCAGCTCACCGAGATCGTCAAGGCCTGGTCGCAGAACCCGCGCGTGCTCATCCTCGACGAGCCGACCTCGGCCCTGTCCGGCAACGAGGTGGAGCGGCTGTTCGCGCATGTGCGCCGCCTGAAGAGCCAGGGCCTCGCCATCATCTACGTCTCCCATCGCATGGACGAGATCTTCCGCCTGGCTGACCGCGCCACCATCCTGCGCGATGGCCGCCATGTCAGCACCGGCGCCATCGCCGGGATGACACTGGAAGGGATGATCGCCGACATCGTCGGCCGGCGCTCGCGCGGCTTCTCCGACGTCGCCCGGCACAAGGCCGAGATCGGCGAGGCCATCCTGGAAGCGCGCGGCCTGTCGGGCCGGCACAAGCCGCGCGACGTCGATCTCGTGCTGCGCCGCGGCGAGGTGGTCGGCATTGCCGGCCTGCTCGGCAGCGGCCGCTCCTCGCTCGCCCGGCTCCTCGCCGGCATCGAGCCGATCACCGCCGGCGAGATCCGCGTCCGCGGCCGGCCGATCGCCATCGCCAGCCCCCGGGACGCCATCGCCGCCGGCATCGCCCTGGTTCCCGAGGACCGCGGCCGCCAGGGCTTCGTCGCCGCCCATTCCATCACCAGCAACGTCGCCCTGCCCAACCTCGACCGTCTGTCCGACGCGGGGTGGGTCTCCGCCCGCCGCACCAACCGCCTGGTCGACGACGCCATCCAGCGCCTGCGCATCCGCACCCCGTCGCGCGACAACCCCGTGCGCAACCTCTCCGGCGGCAATGCCCAGAAGGTGGTGATCGCCAAATGGCTCGCCGCCGGGCTCGACGTGCTGGTGCTGGACGAGCCGACGGCCGGCATCGACATCGGCTCCAAGGCGGAGATCGTCACGCTGGTTCGCGAGCTCGCGCGCCAGGGCAAGGCCATCCTCGTGCTCTCCTCGGAGCTGCAGGAGCTGCTGGCGGCCTGCGACCGCATCCTGGTGATGTCGGAGGGGCGCATCGTGCGCGAGATCGCGCGGGACGAGCTCGACGACCCGGCGGAGTCCGCCGGGGGCGACGCCCTGCATCAGGCCGAGCAGCGGCTGCAGAAGGCGGTACAGCAAGCCAGAGGACATGCCGTTTGA
PROTEIN sequence
Length: 528
MSDTESGTVAASDASLAVRMAGVSKQFGGVRALESVDFAVRFGEIHALLGENGAGKSTILKILSGVQAPSAGTVEIAGLAVTDFTPRAAQAAGVTMIFQETSLVPTLTVAQNIFLTREVKVHGLIDDRAAAAKARDLFAELGVDIDPNAAVGELGAGQRQLTEIVKAWSQNPRVLILDEPTSALSGNEVERLFAHVRRLKSQGLAIIYVSHRMDEIFRLADRATILRDGRHVSTGAIAGMTLEGMIADIVGRRSRGFSDVARHKAEIGEAILEARGLSGRHKPRDVDLVLRRGEVVGIAGLLGSGRSSLARLLAGIEPITAGEIRVRGRPIAIASPRDAIAAGIALVPEDRGRQGFVAAHSITSNVALPNLDRLSDAGWVSARRTNRLVDDAIQRLRIRTPSRDNPVRNLSGGNAQKVVIAKWLAAGLDVLVLDEPTAGIDIGSKAEIVTLVRELARQGKAILVLSSELQELLAACDRILVMSEGRIVREIARDELDDPAESAGGDALHQAEQRLQKAVQQARGHAV*