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berkeley_reactor_200306_biofilm_scaffold_48742_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(25594..26439)

Top 3 Functional Annotations

Value Algorithm Source
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Pseudomonas sp. GM50 RepID=J2SKP1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 274.0
  • Bit_score: 368
  • Evalue 5.00e-99
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:EJM62369.1}; TaxID=1144332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM50.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 274.0
  • Bit_score: 368
  • Evalue 7.00e-99
putative nucleoside-diphosphate sugar epimerase similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 273.0
  • Bit_score: 366
  • Evalue 4.10e-99

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Taxonomy

Pseudomonas sp. GM50 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGGCAATCGAGAAGCAGGATTCCGTCACGCTCGTGCTCGGCGGCACCGGCAAGACCGGCCGCCGGGTCGCGGAGCGGTTGCGGCGGGCCGGGCATGCGGTGCGGATCGGCTCGCGCGCCGGCACGCCGCCCTTCGACTGGGACAGGCGGGAGAGCTGGGACGCGGCGCTGGCCGGCGCGACATCGGCCTATGTCGCGTTCCAGCCGGACCTCGCCGTGCCCGGTGCGCTGGAGACCGTCGACGCCTTCTTCCGCCGGGCCGCGGCGAGCGGCGTCGAGAGGCTGGTGCTGCTCTCCGGCCGGGGCGAGCCGGAGGCGGAGAACGCCGAGCGGGCGCTGCAGGCCGCCGGCGTCCCCTGGACGATCTTGCGCGCCAGCTGGTTCTGCCAGAACTTCAGCGAGAGCGTCTTCCTCGAGCCGATCCGGGCCGGCCTTCTCGCCCTGCCGGTCGGGGCGGTGGCCGAGCCCTTCGTCGACGCCGACGACATTGCCGACATCGCCGTCGCGGCCCTGACCGCCCCCGGACATGCCGGCCGGCTCTATGAGATCACCGGGCCGCGGGCGCTGACCTTCGCCGATGCGGCGGCCGAGATCGCCCGCGCCACCGGCCGCGACATCGCCTTCGTCCAGGTGAGCCCCGAGGACTATCGGGCCGCGCTCGTCCGCGAGGGCGTGCCGCAGATCTTCGTCGACCTCGTCCTCCACCTCCTCACCACCGTGCTCGACGGGCGCAACGCCCCGACGGCGCAAGGCGTGCAGCAGGCACTCGGCCGCCCGCCGCGCGACTTTACGGATTTCGCCCGGGCGGCTGCGGCCACCGGCATCTGGGGAGGCCGTCATGACTGA
PROTEIN sequence
Length: 282
MAIEKQDSVTLVLGGTGKTGRRVAERLRRAGHAVRIGSRAGTPPFDWDRRESWDAALAGATSAYVAFQPDLAVPGALETVDAFFRRAAASGVERLVLLSGRGEPEAENAERALQAAGVPWTILRASWFCQNFSESVFLEPIRAGLLALPVGAVAEPFVDADDIADIAVAALTAPGHAGRLYEITGPRALTFADAAAEIARATGRDIAFVQVSPEDYRAALVREGVPQIFVDLVLHLLTTVLDGRNAPTAQGVQQALGRPPRDFTDFARAAAATGIWGGRHD*