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berkeley_reactor_200306_biofilm_scaffold_48742_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(29380..30438)

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter, permease protein RbsC-1 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EM8_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 350.0
  • Bit_score: 537
  • Evalue 5.90e-150
sugar ABC transporter permease, rbsC-1 similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 350.0
  • Bit_score: 537
  • Evalue 1.70e-150
Sugar ABC transporter, permease protein RbsC-1 {ECO:0000313|EMBL:BAB50890.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 350.0
  • Bit_score: 537
  • Evalue 8.30e-150

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGAGGTGGAAGCTCGAGGCACGCAGCGATGCGGCGCCCTGGCTGGGCCTCGCGCTGCCGCTCGCCGCGGTGGCGGCGACGCTGGTACTGTGCAGCGGCCTGATCGCGCTCGCCGGCGCCAACGCGCTCGAAGCCTATCGGCTGATGCTCGCCGGGGCGCTGGGGTCGCAGTTCAATGCCACGGAGACGCTGGTCAAGGCGGCGCCGATGATCTTCACCGGCCTTGCGGTCGCCGTCGCCTTCCGTGCCCGGTTCTGGAACATCGGCGCGGAGGGGCAGCTGATGGCCGGGGCCGTCGCCGCCGCCTTCGTTGGCGCCATTCCCATGCCCGGCCCGCTCGCCATGCTGGCCATGGCGCTGGCCGGCGCGGCGGCCGGCGGGCTGGTGGCGCTGGTGCCGGCGCTGCTGCGGGTGAAGCTCAAGGTCGACGACGTCGTCACCTCGCTGCTGCTCAACTCGGTCGTGCTCTACGCGGTCATGGCGCTGATCGAGGGGCCGTGGAAGGACCCGTTCAGCGGCTATCCCATCTCGCCGCCGATCGAGGATGCGGCGGCGCTGCCGCGCCTGATCACCGGCACGCGGCTGCATCTCGGCGTCGCCGCCGCCTTCATCGCCGCGGGCCTCGTCTGGGTGCTGATGGCGCGGACCACGCTGGGCTTTCGCATCCGCGTCACTGGCGAAAACCCGGCCGCCGCGCGTTATGGCGGCATCGCGGTCGGCCGGGTGCTCGTCGCCACGGCGCTGATCTCGGGCGGGCTGGCGGGCCTCGCCGGCGTCGGCGAGGTCGGCGGTGTGCATTTCCAGGTGATGAGCGACCTGTCGCCGGGATTCGGCTACAGCGGCATCGTCATCGCCATGCTGGCGCGGCTCAACCCGCTCGGCGTCGTGCCGGCGGCGATCTTCTTCGCTATCGTCATGACCGGCGCCGAGGCGATGTCGCGGTCGACCGGCGTGCCGGTGTTCCTGGCCGACGTGCTGCAGGGCACCGCCCTCATCGCCATGCTGGTGGCGCTGCTGTTCACCACGCACCGCATCCGCCGGGCCGGAGCCGCAGCATGA
PROTEIN sequence
Length: 353
MRWKLEARSDAAPWLGLALPLAAVAATLVLCSGLIALAGANALEAYRLMLAGALGSQFNATETLVKAAPMIFTGLAVAVAFRARFWNIGAEGQLMAGAVAAAFVGAIPMPGPLAMLAMALAGAAAGGLVALVPALLRVKLKVDDVVTSLLLNSVVLYAVMALIEGPWKDPFSGYPISPPIEDAAALPRLITGTRLHLGVAAAFIAAGLVWVLMARTTLGFRIRVTGENPAAARYGGIAVGRVLVATALISGGLAGLAGVGEVGGVHFQVMSDLSPGFGYSGIVIAMLARLNPLGVVPAAIFFAIVMTGAEAMSRSTGVPVFLADVLQGTALIAMLVALLFTTHRIRRAGAAA*