ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_41009_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(940..2016)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 356.0
  • Bit_score: 450
  • Evalue 1.80e-123
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG68_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 360.0
  • Bit_score: 408
  • Evalue 5.50e-111
ribosome-associated GTPase similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 360.0
  • Bit_score: 408
  • Evalue 1.60e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
GTGCTCGAACCCTATGGCTGGAGCTCCGCGCTCCAGAACGATTTTGCGCCGCATGCGGCGGCGGGGCTGGTCCCCGGCCGCGTCACCGTCCAGCAGCGCGGCCTCTATCGCCTGATCACCCCGTCCGGGGACCTCGCCGCCGGCCTGTCCGGCCGTCTCGCCTTCGAGGCCGAGGCGGGAGGCTATCCGGTCGCCGGAGACTGGGTGGCCGCTGCCGCCCGCCCGGCGGAGGGCACGGCGACCATCCAGGCCGTGCTGCCGCGCCGCACCCTGTTCCGGCGCCGGGCGGCCGGCCCCGGCGAACCCGCGGCGCAGGCCGTGGCGGCCAATGTCGACCTGGCGCTGCTGCTCGCCTCGTTCAACGCCGACTTCAACCTGCGGCGGCTGGAGCGCTATCTCGCCATCGCCTGGGAGAGCGGCGCCGAGCCCGTGGTGGTGCTGACCAAGGCCGACGCCGGCACCGATCCGGCGCGGGTCGTGGCGGCGGCGGAGAGCGTGGCGGCGGGGGCGCCCGTTCTCGCCGTCTCGTCCCTCACCGGCCAGGGCCTGGCGGCGGTGCGCGCGCTGATCCGGCCTGGCCGCACGGCCGTGCTGCTCGGCAGCTCCGGCGTCGGCAAGTCGACCCTGCTCAACGCTCTCGCCGGCGGGCCGGTGATGGCGACGCAGGCGATCCGCGAGCAGGATGCGCGCGGGCGCCACACCACCACGCATCGCGAGCTCGTGCTGCTGCCGGGCGGGGGGCTGGTGCTCGACACCCCCGGCATGCGCGAGCTCGGCCTGTGGGACGCGGAGAGCGGCGTCTCCGCCACCTTCGCCGATATCGAGGCGCTGGCGCAGCAATGCCGCTTCGGCGACTGCGCGCATGGCAGGGAGCCGGGCTGCGCCGTCCGGGCCGCGCTGGAGGAGGGCAGGCTCGAGGAGGCGCGGTGGCGCAGCTATGACAAGCTGCGCCGCGAGCTGGCGCATCTCGACCGCCGGGACGATCCGGTGGCGCGGGCCGAGGAGCGCCGGCGCTGGGCCCGCATCAGCAAGGCCCACCGCGGCGGCCCGGCCAAGCGGCGCTGGGACGAGGATTAG
PROTEIN sequence
Length: 359
VLEPYGWSSALQNDFAPHAAAGLVPGRVTVQQRGLYRLITPSGDLAAGLSGRLAFEAEAGGYPVAGDWVAAAARPAEGTATIQAVLPRRTLFRRRAAGPGEPAAQAVAANVDLALLLASFNADFNLRRLERYLAIAWESGAEPVVVLTKADAGTDPARVVAAAESVAAGAPVLAVSSLTGQGLAAVRALIRPGRTAVLLGSSGVGKSTLLNALAGGPVMATQAIREQDARGRHTTTHRELVLLPGGGLVLDTPGMRELGLWDAESGVSATFADIEALAQQCRFGDCAHGREPGCAVRAALEEGRLEEARWRSYDKLRRELAHLDRRDDPVARAEERRRWARISKAHRGGPAKRRWDED*