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berkeley_reactor_200306_biofilm_scaffold_41009_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(14469..15170)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F0P7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 231.0
  • Bit_score: 384
  • Evalue 4.30e-104
putative short-chain dehydrogenase/reductase similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 232.0
  • Bit_score: 384
  • Evalue 2.10e-104
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHS53784.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 231.0
  • Bit_score: 384
  • Evalue 6.00e-104

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCCGACAAGGTCGCCATCGTCACCGCCGGCGGCAGCGGCATGGGCGCCGCCGCGGCGCGCCGCCTCGCCGCCGACGGCTATGCCGTCGCCATCCTGTCCTCGTCCGGCAAGGGCGAGACGCTGGCCCAGGAGCTCGGCGGCATCGGCGTCACCGGCTCCAACGAGTCCAACGACGACCTGAAGCGCCTGGTCGACGCCGTGGTGGCGCGCTGGGGCCGGGTCGACGTGCTGGTCAACAGCGCCGGCCACGGCCCGCGCGCCCCGATCCTGGAGATCTCCGACGAGGACTGGCACCGCAGCATGGAGGTCTATTTCCTCAGCGCCGTCAGGCCGACCCGGCTGGTGACGCCGATCATGCAGGCGCAGCGCTCCGGCTCGATCGTCAACATCTCCACCGCCTGGGCCTTCGAGCCGACGCCGATGTTCCCGACCTCGGCGGTGGCCCGCGCCGGCCTCGCCGCCTTCACCAAGATCTTCGCCGAGACCTATGCGCCTTTCAACGTGCGCATGAACAACGTCCTGCCCGGCTGGATCGACAGCCTGCCCGGCACCGAGGAGCGGCGCGAGAGCGTGCCGATGCAGCGCTACGGCACCATGGCCGAGATCGCCGGCACCATCGCCTTCCTCGCCTCGCCCGACGCCGGCTACATCACCGGCGAGAACATCCGGGTCGACGGCGGGCTGATGCGGTCGGTGTAG
PROTEIN sequence
Length: 234
MADKVAIVTAGGSGMGAAAARRLAADGYAVAILSSSGKGETLAQELGGIGVTGSNESNDDLKRLVDAVVARWGRVDVLVNSAGHGPRAPILEISDEDWHRSMEVYFLSAVRPTRLVTPIMQAQRSGSIVNISTAWAFEPTPMFPTSAVARAGLAAFTKIFAETYAPFNVRMNNVLPGWIDSLPGTEERRESVPMQRYGTMAEIAGTIAFLASPDAGYITGENIRVDGGLMRSV*