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berkeley_reactor_200306_biofilm_scaffold_41009_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 27395..28213

Top 3 Functional Annotations

Value Algorithm Source
putrescine/spermidine ABC transporter permease n=1 Tax=Xanthobacteraceae RepID=UPI000379CA65 similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 272.0
  • Bit_score: 436
  • Evalue 1.90e-119
Putrescine transport system permease protein PotI {ECO:0000313|EMBL:ESR23693.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 270.0
  • Bit_score: 422
  • Evalue 3.90e-115
ornithine carbamoyltransferase similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 267.0
  • Bit_score: 411
  • Evalue 1.40e-112

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Taxonomy

Lutibaculum baratangense → Lutibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGAAGAAGGGTCCGACCTGGTTCAACCTGACCTCGATCGCGCTGGGCTTTGCCTTCCTCTACCTGCCGATCGTCATCCTGATCATCTATTCCTTCAACGACAGCCGCCTCGTCACGGTGTGGGGCGGCTGGTCGACGCGCTGGTACGTCGCCCTGTTCCAGGACGAGGCCTTCATGAGCTCGGCCTGGATCACGCTCCGGGTCGGCGCCCTGTCGGCGACGCTGGCGACCATCCTCGGCACCCTCGCCGCGATCGTGCTGGTGCGCATGGGCCGGTTCCGCGGCCGCATCCTGTTCTCCGGCATGGTCTATGCGCCGCTCGTCATGCCGGAAGTCATCACCGGCCTCTCGCTGCTGCTCCTGTTCGTGGCGCTCGACATCTCGCGCGGCTTCTGGACCATCACCCTCGCCCATACCACCCTGACCATGTGCTTCGTGGCGGTGGTGGTGCAGTCGCGCCTGCTCACCTTCGACCGTTCGATCGAGGAGGCGGCGCTGGACCTCGGCTGCCGGCCGTTCAAGGCCTTCTTCCTGATCACGCTGCCGATCATCCTGCCGGCCGTGGTGTCGGGCTGGATGCTGGCCTTCACCCTGTCGCTCGACGATCTCGTCATCGCCAGCTTCACCACCGGGCCGGGCGCCTCCACCCTGCCGATGCGGATCTATTCCTCTGTGCGTCTGGGTGTCACGCCCCAGATCAACGCCGCCTGCACGCTCCTGATCGCCATCGTCGCCGTGGGCGTGATCATCGCTTCGATCTCGACCAAGCGGGCGGAGATGGAGCGCGAGCGGGCGGAACGGCTGGCGGCGCAGGGATAG
PROTEIN sequence
Length: 273
MKKGPTWFNLTSIALGFAFLYLPIVILIIYSFNDSRLVTVWGGWSTRWYVALFQDEAFMSSAWITLRVGALSATLATILGTLAAIVLVRMGRFRGRILFSGMVYAPLVMPEVITGLSLLLLFVALDISRGFWTITLAHTTLTMCFVAVVVQSRLLTFDRSIEEAALDLGCRPFKAFFLITLPIILPAVVSGWMLAFTLSLDDLVIASFTTGPGASTLPMRIYSSVRLGVTPQINAACTLLIAIVAVGVIIASISTKRAEMERERAERLAAQG*