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berkeley_reactor_200306_biofilm_scaffold_42397_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(233..1039)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003792C1F similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 266.0
  • Bit_score: 255
  • Evalue 4.50e-65
CtpC protein {ECO:0000313|EMBL:KIZ45147.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 266.0
  • Bit_score: 243
  • Evalue 2.50e-61
Flp pilus assembly CpaB similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 266.0
  • Bit_score: 242
  • Evalue 1.10e-61

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGAAAACCGCGCAAGTCGCCGTCTTGCTGATTGCGCTCGCCGCGGCCGGTGGGGCTGGCTACGTCTATCTCGCCTCCAACCCGGCGCCCGTGCCGCTGGCCGTGGCCCCGCCCGCGCCGGTGGCCGCCACCAAGGTCCTGGTCGCGGCCAGCGACATCAATGTCGGCACCGCCCTTGGCCCGCGCGACATGCGCTGGCAGGACTGGCCGGAGGCCTCGATCGGCCCGACCTACATCACCGACAAGAACGACCCTGCCGCCATGGAGACCTGGAAGGGCGCCATCGTCCGCACGCCTTTCGTCGCCGGCGAGCCGCTGCGCGCCCAGAAGCTGGTCAAGGCCAACAGCGCCGGCTTCCTCTCCGCCATCCTGCCCGCGGGCATGCGGGCCGTCGCCACCAAGATCGCGGTCGACACCGCCGTGGGCGGCTTCATCCTGCCCAACGACCGCGTCGACGTGATCCTGACGCGGCGCGATCCCGAGACCACCAAGCAGACCGGCGTCGACGCCTGGACCAGCGAGATCATCCTGCGCAACGTCCGCGTTCTCGCCATCGACCAGAACTTCGAGGAGCAGGACGGCCAGAAGGTCATCGCCGGCTCGACGGCGACGCTCGAGCTCACGCCGCCGCAGACCGAGGTGCTCGCCCTGGGCAAGGAGATGGGGTCGATCTCCCTCTCGCTCCGCCCGCTCGCCGACGCCAACCCGACCGGGCTCGAAGGCGCCGCCACGCCCGAGACCGGCCAGGGCGTCATGGGGGCTGGCACCGTCGTGCGCTACGGCATCACCAACGCTGCGCCCCGCTGA
PROTEIN sequence
Length: 269
MKTAQVAVLLIALAAAGGAGYVYLASNPAPVPLAVAPPAPVAATKVLVAASDINVGTALGPRDMRWQDWPEASIGPTYITDKNDPAAMETWKGAIVRTPFVAGEPLRAQKLVKANSAGFLSAILPAGMRAVATKIAVDTAVGGFILPNDRVDVILTRRDPETTKQTGVDAWTSEIILRNVRVLAIDQNFEEQDGQKVIAGSTATLELTPPQTEVLALGKEMGSISLSLRPLADANPTGLEGAATPETGQGVMGAGTVVRYGITNAAPR*