ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_42397_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 12210..12926

Top 3 Functional Annotations

Value Algorithm Source
phosphoglycolate phosphatase n=1 Tax=Rhizobium loti RepID=UPI00037E9FDA similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 226.0
  • Bit_score: 276
  • Evalue 1.30e-71
HAD-superhydrolase, subIIB family protein {ECO:0000313|EMBL:AID28279.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 226.0
  • Bit_score: 278
  • Evalue 6.20e-72
HAD family hydrolase similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 221.0
  • Bit_score: 272
  • Evalue 6.80e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCCTGTCCGCGCCCTTGCCACCGACTATGACGGCACCATCGCCGATGACGGCGTGCTCGAGCCGGAGACCGTCGCCGCGCTCGAGCGATTCCGGGCCTCGGGGCGGCACCTCATCCTGGTGACGGGACGCGAGCTTGCCGAGCTGCAGCAGGTCTGCCCCCGGCTCGACCTGTTCGAGCTGGTGGTCGCCGAGAACGGCGCGCTGCTCTACGATCCGAGAAGCAAGGAGGAAGTCCCCCTCGCCGAGCCGCCCTCGGCCGAGCTGGTCGAGCGGCTGAAGGCGGCCAAGGCCCCGGGGCTCTCGGTCGGGCGCAGCATCATCGCCACCTGGGAGCCGTTCGAGACGGTGGTGCTGGAGGCGATCCGCGAGCTCGGGCTGGAGCTGCAGATCATCTTCAACAAGGGCGCCGTCATGGTGCTGCCCGCGACGGTGAACAAGGCGACGGGCCTCGCCGCGGCGCTGGAGCGGCTGCACCTGGCGGCCGCGGCGGTGGTCGGCGTGGGCGACGCCGAGAACGACCACGCCTTCGTCAAGACCTGCGGCTTCGGCGTGGCGGTCGCCAACGCCATTCCCGCGCTCAAGGCGGAGGTCGATATCGTGACGTCAGGCGCGCGCGGGGCCGGCGTCGCCGAGCTGATCGACCGGATCCTCGCGACCGACCTGGAGGAGGTGGTGGTGCCCCGCCGCGTCCGTCGGACCGCGACGCCGGCGTGA
PROTEIN sequence
Length: 239
MPVRALATDYDGTIADDGVLEPETVAALERFRASGRHLILVTGRELAELQQVCPRLDLFELVVAENGALLYDPRSKEEVPLAEPPSAELVERLKAAKAPGLSVGRSIIATWEPFETVVLEAIRELGLELQIIFNKGAVMVLPATVNKATGLAAALERLHLAAAAVVGVGDAENDHAFVKTCGFGVAVANAIPALKAEVDIVTSGARGAGVAELIDRILATDLEEVVVPRRVRRTATPA*