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berkeley_reactor_200306_biofilm_scaffold_42397_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19733..20872

Top 3 Functional Annotations

Value Algorithm Source
Glycine cleavage T protein (Aminomethyl transferase) n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UEQ3_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 377.0
  • Bit_score: 566
  • Evalue 1.30e-158
glycine cleavage T protein (aminomethyl transferase) similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 377.0
  • Bit_score: 566
  • Evalue 3.60e-159
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:ABR62133.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 377.0
  • Bit_score: 566
  • Evalue 1.80e-158

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGAGCGTGATGTCATGGCGGCGGTCGCCGCTGGCCGAGCGGCACAGGGCCCTGGGTTCCAGCCTCGAAGACTGGAACGGCATGGAGACCGCCTGGACCTATACGGCGAGCAGCCTGCCGGACGAGCACGAGGCGATCCGCACCAAGGCGGCGCTGATGGACGTCTCGGGCCTGCGCAAGGCGCATCTCGTCGGCCCGCATTCGCACCAGGTGCTGCAGCGCCTGACCACCCGCGACGTGCGCAAGATCTATCCCGGCAAGTCGGTCTATGCCTGCGTGCTCAACGAGGCCGGCAAGTTCACCGACGACTGCATCCTCTACCGCACCGGCCCCAATTCCTGGATGACGGTCTACGGCTCGGGCACGGGCCTGGAGGACATGGGCCGGGAGAGCATCGGCAAGAACGTCGCGGTGCTGTTCGACGACGACCTGCAGGACCTGTCGCTGCAGGGCCCGCTCGCCGTGAGCTATCTGGAAAAGCACGTGCCCGGCATCCGGGACCTCAAATATTTCCACCACATGCAGACGACGCTGTTCGGCAAGCCGGTGATGATCTCGCGCACCGGCTATACCGGCGAGCGCGGCTACGAGATCTTCTGCAAGGCCGAGGACGCGGTCGGCATCTGGGACAGGATCCTGGAGGAAGGCAAGGCGATGGGCATCGTGCCCGCCTCCTTCACCGCGCTCGACTGGCTCAGGGTGGAGAGCTATCTCCTGTTCTACCCCTACGACAATTCGCAGATGTATCCCTTCGAGACGGAGGGACCGGGCGACACGCTGTGGGAGCTCGGCCTCGACTTCACGGTCTCGCCGGGCAAGACCGGCTTCCGCGGCGCGGAGGAGCATTACCGCCTCAAGGGCAAGGAGCGCTTCAGGATCTTCGGCGTGCTCGCCGACACCGACCAGGTGCTGGACGCCGGCGACGCGCTCTGGGCCGATGGCAAGCGGGTGGGCACCGTCACCTGCGGCATGGTCTCGCGCGCCACCAAGCGCTCCATGGCGATCGCCCGCATGGAGGTGGACGCGGCGAAGATGGGCACCAAGCTGGAGGTGCGCGGCAAGGGCGTGACCTGCCCGGCCATCGCCCACCCGATCACTTTCGACGACCCGGAGAAGAAGAAGCGCACCGCCGTCGGCTGA
PROTEIN sequence
Length: 380
MSVMSWRRSPLAERHRALGSSLEDWNGMETAWTYTASSLPDEHEAIRTKAALMDVSGLRKAHLVGPHSHQVLQRLTTRDVRKIYPGKSVYACVLNEAGKFTDDCILYRTGPNSWMTVYGSGTGLEDMGRESIGKNVAVLFDDDLQDLSLQGPLAVSYLEKHVPGIRDLKYFHHMQTTLFGKPVMISRTGYTGERGYEIFCKAEDAVGIWDRILEEGKAMGIVPASFTALDWLRVESYLLFYPYDNSQMYPFETEGPGDTLWELGLDFTVSPGKTGFRGAEEHYRLKGKERFRIFGVLADTDQVLDAGDALWADGKRVGTVTCGMVSRATKRSMAIARMEVDAAKMGTKLEVRGKGVTCPAIAHPITFDDPEKKKRTAVG*