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berkeley_reactor_200306_biofilm_scaffold_55848_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18538..19182)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEB247 related cluster n=1 Tax=unknown RepID=UPI0003CEB247 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 207.0
  • Bit_score: 307
  • Evalue 1.00e-80
Recombinase {ECO:0000313|EMBL:ESX85295.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 207.0
  • Bit_score: 303
  • Evalue 1.60e-79
Resolvase domain protein similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 207.0
  • Bit_score: 286
  • Evalue 5.40e-75

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Taxonomy

Mesorhizobium sp. LSHC412B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGCAACTATCTTGTACGCCCGCGTCTCGACCGCCGGCCAGACGATTGACCACCAGCGTTCCCAGGCGGAGGCGGCCGGGTTCGCTATCGATGAGATCATCGCCGATCACGGAATCTCCGGGGTGGCAACCCGCCTGATCGAGCGGCCCGAGGGGAAGCGGCTCTATGACAAGCTTCGCGCCGGGGACACCCTCGTGGTTCGCTGGGTGGATCGCTTGGGCCGCAACTATCAGGACGTTTGCGACGCGATCCGGGAGTTCATGCGGCGGGGCGTCGTAATCCGCACCGTAATCCACAACATGGTGTTCGACGGGGCGACGAAGGACCCGATGCAACAGGCCGTGCGAGACGCCCTCATCGGCTTCATGGCGGCTCTGTCCCAAGCACAGGCCGAGGCGACCAGGGAGGCGCAGCGGGCCGGCATCGAGCACGCGAAGGAGCAGGAGGGGCGATATCTGGGTCGCAAGCCGACGTACACCCGGGAGACGCTGGCGGCTGTCAGGGCCCTTATACAGGCAGGGACGGCGGGCACCTCCGATATCGCACGGACAACGGGGCTGAGCAGGCAGACGGTTCTACGGATCAAAGAGGACCCGGCGAAGGCCGAGAAGGCGCTGGACGCCTGGGAGACTGGCGAGGGCTAG
PROTEIN sequence
Length: 215
MATILYARVSTAGQTIDHQRSQAEAAGFAIDEIIADHGISGVATRLIERPEGKRLYDKLRAGDTLVVRWVDRLGRNYQDVCDAIREFMRRGVVIRTVIHNMVFDGATKDPMQQAVRDALIGFMAALSQAQAEATREAQRAGIEHAKEQEGRYLGRKPTYTRETLAAVRALIQAGTAGTSDIARTTGLSRQTVLRIKEDPAKAEKALDAWETGEG*