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berkeley_reactor_200306_biofilm_scaffold_53974_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1097..1834

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030DB751 similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 241.0
  • Bit_score: 154
  • Evalue 7.60e-35
Pilus assembly protein {ECO:0000313|EMBL:ETR77374.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 249.0
  • Bit_score: 166
  • Evalue 4.60e-38
pilus assembly protein CpaD similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 232.0
  • Bit_score: 149
  • Evalue 1.20e-33

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGTCGGTTCTTTCCTCCGCCCGCCGCAGGACCCGGATCGTCCCCGGACCGTGCGCCGCGGCCGGCCTGCTCGCCCTCACGCTCGCCGCCTGCGCGCCGACCAACCGCGTCGTCGGCCCGCCGGACCCGACCTACACCCAGGTCCACCCCATCGTGCTCAACCATGGCAGCCGCTCGATCGACATCTTCCTGGCCGGCGGCAGCGGCCATATCGGCGCCCGGCAGATGGCCGACGTCCGGGCCTTCGCGGCCGAGTACCGGCGCAGCGGCGAGGGGCCGCTGCTGATCGGCTTCCCGACCACCGACCCCACCGCCCGCCGGGCCGGGCAGGGCATCCGCGAGGCGCTCGCCTCGGCCGGCGTCACCTCGGCCCGCACCGGCTCCTACCGGCCCGACGACCCCGAGGCGATCGCGCCGGTGAAGCTCGCCTTCACCCGCCTCCAGGCGCAGGTGGAGGGCCCCTGCGGCCAATGGCCGGACGATATCGCCGAGTATAACGGCACGCTGAGCGGCTGGAACAATCGCGCCCAGCCCTGGGAGAACTTCGGCTGCGCCACCCAGAACACCCTCGCCAAGCAAGTGGCCGACCCGCTCGACCTCGTTCGCGCCCGTCCGGAAGGGCCGAGCAGCGCCGTCAGGCGCGTCACGGTCATGAGCAAGTACGGCCAGGGCCAGGCGACTGCCACGATCTATCCCGACGAGGGCAAGGAAAAGATCAATACCGGCGTGGGCCAGTGA
PROTEIN sequence
Length: 246
MSVLSSARRRTRIVPGPCAAAGLLALTLAACAPTNRVVGPPDPTYTQVHPIVLNHGSRSIDIFLAGGSGHIGARQMADVRAFAAEYRRSGEGPLLIGFPTTDPTARRAGQGIREALASAGVTSARTGSYRPDDPEAIAPVKLAFTRLQAQVEGPCGQWPDDIAEYNGTLSGWNNRAQPWENFGCATQNTLAKQVADPLDLVRARPEGPSSAVRRVTVMSKYGQGQATATIYPDEGKEKINTGVGQ*