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berkeley_reactor_200306_biofilm_scaffold_53974_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3135..4571

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VK23_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 487.0
  • Bit_score: 782
  • Evalue 1.40e-223
CpaF protein {ECO:0000313|EMBL:BAQ49014.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 483.0
  • Bit_score: 786
  • Evalue 1.10e-224
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 487.0
  • Bit_score: 782
  • Evalue 4.10e-224

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Taxonomy

Methylobacterium aquaticum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
ATGTTTGGTAAGCGTGGCAATGTCGGTCCGGTGCCGGCACCGGGTTTCGGGGCGCCGGATGCCGCGGCGCGGACGCCTGCGTCCTCGCCGGCGAAGGCTGCGTCGTCGCCCGTCCGCCCATCGGAGGCCGTACCGGTCGAGACCCGCAAGTCCGACAAATATTACGAAACCAAGAGCATGGTCTTCGGCGCGCTGATCGACGCGATCGATCTGTCGCAGCTCGCCAAGCTCGACGGCGACAGCGCGCGCGAAGAGATCCGCGACATCGTCAACGAGATCATCGGCATCAAGAACATCGTGATGTCGATCGCCGAGCAGGAGGAGCTGCTCGACGACATCTGCAACGACGTCCTCGGATACGGGCCGCTCGAGCCGCTGCTCTCGCGCGACGACATTGCCGACATCATGGTCAACGGCGCCGGCCGGACTTATATCGAGGTCGGCGGCAAGATCCAGCTCACCAACGTGCGCTTCCGCGACAATGCGCAGCTGATGAACATCTGCCAGCGCATCGTCAGCCAGGTCGGGCGCCGCGTCGACGAGTCCTCGCCCATCTGCGACGCCCGCCTGCCCGACGGCCCGCGCGTCAACGTCATCGCCCCGCCGCTGGCGATCGACGGGCCGGCGCTCACCATCCGCAAGTTCAAGAAGGAGAAGCTGACGCTCGATCAGCTGATCAAGTTCGGCGCCATCTCGCCCGAGGGCGGCGAGATCCTGAAGATCATCGGCCGCGTGCGCTGCAACGTGGTCATCTCCGGCGGCACGGGCTCGGGCAAGACCACGCTGCTCAACTGCCTGACCAACTATATCGACAACGACGAGCGCGTCATCACCTGCGAGGACGCCGCCGAGCTGCAGCTGCAGCAGCCGCACACCGTGCGCCTGGAGACCCGGCCGCCGAACCTGGAGGGCAGCGGCGCCGTCACCATGCGCGACCTCGTCCGCAACTGCCTGCGCATGCGTCCCGAGCGGATCATCGTCGGCGAGGTCCGCGGCCCCGAGGCCTTCGACCTGCTGCAGGCGATGAACACCGGCCATGACGGCTCGATGGGCACGCTGCACGCCAACAGCCCGCGCGAATGCCTGTCGCGCATCGAATCCATGATCACCATGGGCGGATTCGCGCTGCCCTCGCGCACCATCCGCGAGATGATGACCACCTCGATCGACGTCATCATCCAGGCGGCGCGCCTGCGCGACGGCTCGCGCCGCATCACCCACATCACCGAGGTGATGGGCATGGAGGGCGACGTGATCACCACCCAGGACCTGTTCGTCTACGACCTCATCGGCGAGGACCCCAATGGCCGGCTGATCGGCCGTCACCGCTCGACCGGCATCGGCCGTCCGCGCTTCTGGGAGCGGGCGCGCTACTACGGCGAGGAGAAGCGGCTGGCCGCCGCCCTCGACGCCGCCGAGATCGAGGCGGCGCACTAG
PROTEIN sequence
Length: 479
MFGKRGNVGPVPAPGFGAPDAAARTPASSPAKAASSPVRPSEAVPVETRKSDKYYETKSMVFGALIDAIDLSQLAKLDGDSAREEIRDIVNEIIGIKNIVMSIAEQEELLDDICNDVLGYGPLEPLLSRDDIADIMVNGAGRTYIEVGGKIQLTNVRFRDNAQLMNICQRIVSQVGRRVDESSPICDARLPDGPRVNVIAPPLAIDGPALTIRKFKKEKLTLDQLIKFGAISPEGGEILKIIGRVRCNVVISGGTGSGKTTLLNCLTNYIDNDERVITCEDAAELQLQQPHTVRLETRPPNLEGSGAVTMRDLVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPRECLSRIESMITMGGFALPSRTIREMMTTSIDVIIQAARLRDGSRRITHITEVMGMEGDVITTQDLFVYDLIGEDPNGRLIGRHRSTGIGRPRFWERARYYGEEKRLAAALDAAEIEAAH*