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berkeley_reactor_200306_biofilm_scaffold_53974_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4597..5613

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED3C8F similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 340.0
  • Bit_score: 365
  • Evalue 3.00e-98
pilus assembly protein, type II secretion protein similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 316.0
  • Bit_score: 357
  • Evalue 3.00e-96
Pilus assembly protein, type II secretion protein {ECO:0000313|EMBL:CAX24864.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 316.0
  • Bit_score: 357
  • Evalue 1.50e-95

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGATCTTTCCCTTCCGGCGATCGAGGGCCTGCTGCCGCGGGTGAGCCTGCAGGGCCTCGCCTTCGTCTTCTTGGTGACGGTCGCGGTCGGGGCGGTCGCCTATGTCTTCCTCTATCCCGTGCTCTCCGGCCAGGTCCGGGCGGAGAAGCGCCAGAAGGCCGTCCAGGGGCCGGAGCGCAGCAAGCGCGCGGCCCGCGTCGTCGAGGTCTCCAAGCGCGACCAGGTCCTGCAGTCGCTGAAGGAGCTCGACGAGAAGCAGAAGCGGGCCAAATCGCCGCCCCTGTCGGTGCAGATCGAGCAGGCCGGCCTGACCTGGACGAAGCGGACCTTCGCCATCGTCTCCGTCGTCTGCGCGGTGCTGCTGGCCCTGGCCACCTTCTTCATCACCCATTCCCTGATCACGACCGGCATCGCCTTCCTCGTCGGCGGCCTCGGCCTGCCGCGCTGGTATCTCCGGCGCCGCCGCAACAAGCGCCTCAAGGCCTTCACCGAAGAGTTTCCCAATGCGCTCGACGTGGTGGTGCGCGGCGTCAAGGCCGGGCTGCCGCTCGGCGACTGCCTGCGCATCGTCGCCGGCGAGACGGCAGAGCCGGTCAAGGGCGAGTTCCGCTACGTGATCGAGACCCAGACGCTCGGCATCCCCGTCGGCGAAGCGGTGCAGCGCATCTACGAGCGCATGCCCTGCGCGGAGGCGAATTTCTTCGGCATCGTCATCGGCGTCCAGCAGAAGTCCGGCGGCAATCTTTCCGAGGCCCTCGGCAACCTCTCCAAGGTGCTGCGCGAGCGCAAGAAGATGCGGGCCAAGATCAAGGCGGTGTCGACCGAGGCCAAGGCTTCGGCCAGCATCATCGGCGCGCTGCCCCTCGTGGTCATGCTGCTCGTCTACCTCACGACGCCGGCCTACATCGCCCTGCTGTGGCAGACCGACACGGGCAACATCATGCTGGTGTGCTGTGCCCTCTGGATGGCATCCGGCATCTTCGTGATGCGCAAGATGATCAGTTTCGATTTCTGA
PROTEIN sequence
Length: 339
MDLSLPAIEGLLPRVSLQGLAFVFLVTVAVGAVAYVFLYPVLSGQVRAEKRQKAVQGPERSKRAARVVEVSKRDQVLQSLKELDEKQKRAKSPPLSVQIEQAGLTWTKRTFAIVSVVCAVLLALATFFITHSLITTGIAFLVGGLGLPRWYLRRRRNKRLKAFTEEFPNALDVVVRGVKAGLPLGDCLRIVAGETAEPVKGEFRYVIETQTLGIPVGEAVQRIYERMPCAEANFFGIVIGVQQKSGGNLSEALGNLSKVLRERKKMRAKIKAVSTEAKASASIIGALPLVVMLLVYLTTPAYIALLWQTDTGNIMLVCCALWMASGIFVMRKMISFDF*