ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_53974_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8020..9132)

Top 3 Functional Annotations

Value Algorithm Source
Putative amino acid or sugar ABC transport system, permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2T7_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 364.0
  • Bit_score: 490
  • Evalue 1.50e-135
amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 364.0
  • Bit_score: 490
  • Evalue 4.20e-136
Putative amino acid or sugar ABC transport system, permease protein {ECO:0000313|EMBL:ADZ72111.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 364.0
  • Bit_score: 490
  • Evalue 2.10e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGACCGGCGCAAGCGAGCTGCCGCGCTGGGCCGACGTGATCCTGCTGCCGCTGATCAACGTCGCCGCCGCCTTCCTGGCCTCGGGCCTGGTGGTGCTGATCATCGGCGAGAACCCGCTGGAGGCGGTGTCGATCCTGATCCAGGGCGCCTTCGGCTATGCCGAGGGCATCGGCTTCACCCTGTTCTACGCCACCAACTTCATCTTCACGGGCCTGGCCGTGGCGGTGGCCTTCCATGCCGGCCTGTTCAACATCGGCGGCGACGGCCAGGCCTATGTCGCCGGCCTCGGCCTGGCGCTGGCGTGCCTGGCCATGCCCGGCATGCCCTTCCTGGTGGTGCTGCCGGTGGCGGTCCTGGCCTCGATGCTGTTCGGCGCGGCCTGGGCCTTCATCCCCGCCTATCTCCAGGCCAGGCGCGGCAGCCATGTCGTGATCACCACGATCATGTTCAACTTCATCGCCTCGGCGCTGATGGTCTACCTCCTGGTCGACGTGCTGAAGCCCGCCGGCAGCATGAACCCGGAATCGGCGCAGTTCCCGCCGAACACCGTGCTGCCGATGATCCACGACCTGTGGAAGCCCTTCGGCTTCGACCTGGAGTTCACCCGGCTCAACATCTCCTTCGTGCTGGCGCTGGTCGCCGCAGTGGCTGTGTGGGCGCTGATCTGGAAGACGCGGCTCGGCTACGAGATCCGCACCGTCGGGCACAATCCGGTGGCGGCGGTCTATGCCGGCATCTCGCCGGCGCGCATCACCATCATCGCCATGCTCCTGTCGGGCGGCATCGCCGGGCTGATGTCGGTCAACGTGCTGATGGGCGACCAGCAGCGCCTGGTGCTCGACTATACCGCCGGCGCCGGCTTCGTCGGCATCGCCGTGGCGCTGATGGGGCGCTCCCACCCCTTCGGCATCGTGCTGGCCTCGATCCTGTTCGGCGCGCTCTACCAGGGCGGGGCCGAGCTCGCCTTCGAGAAGCCGAACATCAACCGCGACATGATCGTGGTCATCCAGGGCATGGTGATCCTGTTCGCGGGGGCGCTGGAGCACATGTTCAAGCCGCAGCTCGCCGCGCTCCTCGCCCGCCTGCGCCGCCCGCGGATCGCGAGGGCCTGA
PROTEIN sequence
Length: 371
MTGASELPRWADVILLPLINVAAAFLASGLVVLIIGENPLEAVSILIQGAFGYAEGIGFTLFYATNFIFTGLAVAVAFHAGLFNIGGDGQAYVAGLGLALACLAMPGMPFLVVLPVAVLASMLFGAAWAFIPAYLQARRGSHVVITTIMFNFIASALMVYLLVDVLKPAGSMNPESAQFPPNTVLPMIHDLWKPFGFDLEFTRLNISFVLALVAAVAVWALIWKTRLGYEIRTVGHNPVAAVYAGISPARITIIAMLLSGGIAGLMSVNVLMGDQQRLVLDYTAGAGFVGIAVALMGRSHPFGIVLASILFGALYQGGAELAFEKPNINRDMIVVIQGMVILFAGALEHMFKPQLAALLARLRRPRIARA*