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berkeley_reactor_200306_biofilm_scaffold_53974_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(16550..17152)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:EYR78906.1}; EC=1.14.11.33 {ECO:0000313|EMBL:EYR78906.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 195.0
  • Bit_score: 296
  • Evalue 1.80e-77
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003641666 similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 196.0
  • Bit_score: 307
  • Evalue 9.70e-81
alkylated DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 193.0
  • Bit_score: 288
  • Evalue 7.70e-76

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCAGCTCTATCCCTCCCGTTTCGACCGGACGCAGCAGGAGGATCTGGTGGCGGCGATCCGCGCGGCGGTGCGGGCCGCGCCGCTCTACGTGCCGCGCATGCCGCGGACCGGAAAGCCCTTCTCGGTCCGGATGACCAATTGCGGCCGGCTCGGCTGGGTCTCCGACGAGGCCGGCTACCGCTACCAGGCCACCCATCCCGAAACCGGGGAGCCCTGGCCCGCCATTCCCCAGCCGCTCGAGGCGCTGTGGCGCGAGGTCGCCGGCTATCCCCTGCCGCCCGAGGCCTGCCTGGTCAATGTCTATGCCGCCGATGCGCGCATGGGCCTGCACCAGGACCGCGACGAGGCGGATTTCTCCGCCCCGGTGGTCTCGGTCTCGCTCGGCGACACCTGCCTGTTCCGCCTCGGCGGCACCGAGCGCCGCGACCCGACCCGCTCCTTCCGCCTCGCCTCGGGCGACGTCCTGGTGCTCGGCGGCGACAGCCGCCTCGCCTTCCACGGCGTCGACCGGCTCTATCCCGGCACCTCGACGCTGCTGCGCGGCGGCGGGCGCATCAACCTGACGCTGCGCCGGGTGACGAAACCGCCCGCAGCGGCCTGA
PROTEIN sequence
Length: 201
MQLYPSRFDRTQQEDLVAAIRAAVRAAPLYVPRMPRTGKPFSVRMTNCGRLGWVSDEAGYRYQATHPETGEPWPAIPQPLEALWREVAGYPLPPEACLVNVYAADARMGLHQDRDEADFSAPVVSVSLGDTCLFRLGGTERRDPTRSFRLASGDVLVLGGDSRLAFHGVDRLYPGTSTLLRGGGRINLTLRRVTKPPAAA*