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berkeley_reactor_200306_biofilm_scaffold_53974_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(24973..25668)

Top 3 Functional Annotations

Value Algorithm Source
HAD family hydrolase n=1 Tax=Afipia birgiae RepID=UPI0002F14E09 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 224.0
  • Bit_score: 293
  • Evalue 9.80e-77
HAD family hydrolase {ECO:0000313|EMBL:KIZ41346.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 222.0
  • Bit_score: 296
  • Evalue 2.80e-77
pyrimidine 5-nucleotidase similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 226.0
  • Bit_score: 290
  • Evalue 3.10e-76

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGTGCGGCTTCGCACATGTCGAGACCTGGGTGTTCGACCTCGACAACACGCTCTATCCGCACCACGCCAATCTGTGGGAGCAGGTCGACAACCGCATCACCACCTGGATCGCCGCCTATTTCGGCGTCGACGGCCTCACCGCCCGGGCCCTCCAGAAGCACTATTACAAGCAGCACGGCACGTCGCTGCGCGGGCTGATGATCGACGAGGGCATCGCACCCGACCAGTTCCTCGACTTCGCCCACGACATCGACCATTCGCCGCTGGCGCCGGACCCTTCGCTCGGCCTGGCGCTCGCCGCCCTGCCGGGGCGCAAGCTGATCTTCACCTCCGGCTCGCGCCGGCATGCGGAGGCGGTGACGCGCCGGCTCGGCTGCGAGGCGCAGTTCGAGGACGTGTTCGACATCGTCGCCGCCGACTTCGTGCCCAAGCCCGCGGCAGCCACCTACGAGCGCTTCCTGAAACGCCACGGCGTCGACCCGCGCAAGGCCGCGATGTTCGAGGACCTGTCGCGCAACCTGGAAGTGCCGCACGCCCTCGGCATGGAGACGGTGCTGGTGGTGCCGCGTGGCAGCCGGCAGGTGGAACGCGAGGACTGGGAGCTCTGCGGCCGCGGCGAGGCGCATGTCGACCACGTCACCGATGATCTGCCGGCTTTCCTGACAGATTTGCCGGCAAAGTTCCTCGGACGCTAG
PROTEIN sequence
Length: 232
MCGFAHVETWVFDLDNTLYPHHANLWEQVDNRITTWIAAYFGVDGLTARALQKHYYKQHGTSLRGLMIDEGIAPDQFLDFAHDIDHSPLAPDPSLGLALAALPGRKLIFTSGSRRHAEAVTRRLGCEAQFEDVFDIVAADFVPKPAAATYERFLKRHGVDPRKAAMFEDLSRNLEVPHALGMETVLVVPRGSRQVEREDWELCGRGEAHVDHVTDDLPAFLTDLPAKFLGR*