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berkeley_reactor_200306_biofilm_scaffold_53974_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(27345..28961)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z303_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 491.0
  • Bit_score: 639
  • Evalue 1.70e-180
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIM30595.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 491.0
  • Bit_score: 639
  • Evalue 2.40e-180
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 502.0
  • Bit_score: 585
  • Evalue 1.40e-164

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
ATGGCCCCCTGCCCGGACAGCGCTGCGCCCGCGCACGCCAACAAATGTGATGTCCCCTGCCCGCCCGGCATGCTACCAAGAGGCGGCCCCCGCTCTTCCCGCCGGGCGATACGCATTCGCATCATGACCGATCCGCATTCCGAGGCCCCGGTTCCGGCTGGCCTCAGCCATTCCGAAATCCGCTCCATCATCGTCGGCATCATGGTGGCGATGTTCCTGGCCGCCCTCGACCAGACCATCGTCGCCACCGCCATGCCGACGATCGGCCGCGAGCTCAACGACCTCGAGCACCTGCCCTGGGTGGTCACGGCCTATCTCCTCACCGCCACGGCGGTGACGCCGCTCTACGGCAAGCTCTCCGACATCGTCGGGCGGCGGACGACGCTGCTGGTCGCCATCGGCATCTTCGTCGCCGGCTCGATCGCCTGCGCCCTGGCGCCGACCATGCTGGTGCTGATCCTGGCGCGCGGCCTGCAGGGGCTGGGCGGCGGCGGGCTGATCTCCCTGGCGCAGACCATCATCGCCGACATCGTCTCGCCGAAGGAGCGGCCGCGCTACCAGGCCTATATTGCCGGCGTCTTCATCCTCTCCAGCGTCAGCGGGCCGGTGCTGGGCGGCTTCTTCGCCGAGCACCTGCACTGGTCGGTGATCTTCTGGATCAACCTGCCGCTCGGGCTGCTCGCCCTGTGGATGACCGGCTCCCTCCTCAGGAAGCTGCCGCGCCACGAGCGGCCGCACCGGCTCGACCTGCTCGGCGCCGGCGTCATGGCCGCGGCGACGGTGGTGCTGATGCTGGCGCTCAACTGGGGCGGCGTGCGCTATGGCTGGTCCTCGGCGCCGATCCTCGGCCTGTTCGCCGCCTCGGCGCTGCTCTGGGCGCTGTTCGTGGCACGGCTGCGCACCGCGCCGGAGCCGCTGATCCCGGCCGAGGTCCTGGCCAACCGCGTGGTGGCCATGGGCACGCTCGCCGCCTGTTTCGGCATGGGCGTGTTCATCGGCCTCACCATCTACATGCCGATCTATCTGGAGACGGTCTATGAGCTGACGGCCAGCCAATCCGGCCTGGCGCTGCTGCCGCTGATGGTCGGCACCGTGACGGGGGCGACCATCTCCGGACGGGTCATGGCTCGCGTCGACCATTACAAGCGCCTGCCGCTGATCGGCCTCAGCATCGCCGTCGCGGCGCTGGCGATCCTGGCCATGGTGCCGCGCGGCCTGCCGCTGGCCGCCCTGGAGGTGGTGATGACCGCCACCAGCCTGGGTCTCGGCACGCTGCTGCCGGTCTCGACGGTGGCGATCCAGAACGCCGTGATGCCGCACCAGATGGGCACGGCCACCGGCACCATGAACTTCTTCCGCTCGCTCGGCGGCGCGCTGATCGTCGCCGGCTTCGGCGCCATCGTGCTCGGCGGCCTGCCGGCAAGCGCCCAGGCCGGCCTCTCGATGGAGCGCCTCGCCGCCAGCTTCGCCGAGCACGGCCTCGACATCGCCTTCGTCTTCCGCTGGGTGTTCGCGGCCGCCGCCCTCGGCCTGACGCTGTCGCTCTGCGCCCTGGCGGCGATGGAGGAGCGGCCGCTCAAGGCCAGCGTGCACGAGGCCAGCGCCGCGGCGGAATAG
PROTEIN sequence
Length: 539
MAPCPDSAAPAHANKCDVPCPPGMLPRGGPRSSRRAIRIRIMTDPHSEAPVPAGLSHSEIRSIIVGIMVAMFLAALDQTIVATAMPTIGRELNDLEHLPWVVTAYLLTATAVTPLYGKLSDIVGRRTTLLVAIGIFVAGSIACALAPTMLVLILARGLQGLGGGGLISLAQTIIADIVSPKERPRYQAYIAGVFILSSVSGPVLGGFFAEHLHWSVIFWINLPLGLLALWMTGSLLRKLPRHERPHRLDLLGAGVMAAATVVLMLALNWGGVRYGWSSAPILGLFAASALLWALFVARLRTAPEPLIPAEVLANRVVAMGTLAACFGMGVFIGLTIYMPIYLETVYELTASQSGLALLPLMVGTVTGATISGRVMARVDHYKRLPLIGLSIAVAALAILAMVPRGLPLAALEVVMTATSLGLGTLLPVSTVAIQNAVMPHQMGTATGTMNFFRSLGGALIVAGFGAIVLGGLPASAQAGLSMERLAASFAEHGLDIAFVFRWVFAAAALGLTLSLCALAAMEERPLKASVHEASAAAE*