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berkeley_reactor_200306_biofilm_scaffold_58265_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9426..9662

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S21 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTA4_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 75.0
  • Bit_score: 134
  • Evalue 3.40e-29
30S ribosomal protein S21 similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 75.0
  • Bit_score: 134
  • Evalue 9.50e-30
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 75.0
  • Bit_score: 134
  • Evalue 4.70e-29

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
GTGCAGGTCCTTGTTCGCGACAACAATGTCGACCAGGCGCTCAAGGCGCTCAAGAAGAAGCTGCAGCGCGAAGGCATCTTCCGCGAGATGAAGCTGCGGGGGCATTACGAGAAGCCGTCGGAGAAGCGGGCCCGCGAGGCCGCCGAGGCCATCCGGCGCGCCCGCAAGCTGGCCCGCAAGAAACTGCAGCGCGAAGGGCTGCTGCCCGCTCCGCCCCCGCGCGCCGACAAGAAGTAA
PROTEIN sequence
Length: 79
VQVLVRDNNVDQALKALKKKLQREGIFREMKLRGHYEKPSEKRAREAAEAIRRARKLARKKLQREGLLPAPPPRADKK*