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berkeley_reactor_200306_biofilm_scaffold_58265_46

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(42625..43575)

Top 3 Functional Annotations

Value Algorithm Source
RpiR family transcriptional regulator n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N0P7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 309.0
  • Bit_score: 150
  • Evalue 1.80e-33
RpiR family transcriptional regulator {ECO:0000313|EMBL:KJY37760.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 316.0
  • Bit_score: 154
  • Evalue 1.40e-34
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 273.0
  • Bit_score: 148
  • Evalue 2.00e-33

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Taxonomy

Streptomyces sp. NRRL S-444 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGTCATCTGAAGGAAAAATTCTTCAAGCGCCGCCGGACGACGGCGCGACCGCGGCGATCGACATCTTCCAGAAGCTGGTGGCGGCAGCGCGCTCGCGCGACCGCACCATGGCCGGCCTGTCGCAATGGATCATCGCCAACCAGGACCGGGCGGCAGGCCTGTCGATCTCGAGCCTGGCGCAGCAGACCGGGGTGAGCGAGACCACGGTGTTCCGCTTCTGCAAGCTGCTCGGCCTCAACGGCTACAAGGACCTGCGCTTCGCCCTGGCCGAGAGCCGCGGCCTGGCGCTCGGCGCCCAGCTCGCCGGCCTGCCCGGCGGCGGCGAGGGCGCGACGGAGCACCCGATGGCCTCGATCATGCGCCGGGTGGTCGAGGTCAATTCCGAGCAGCTGCTCAAGACCATGAGCCTGGTGTCGCTGTCGGCTCTCGAGCAGGCGACCGAGGCGCTGCTGGCCGCCAACCATATCCACCTCGTCGGCTTCGGCAGCTCGGCGCCGGTCGCCTTCGACGCTTATCAGCGCCTGCTCTGCCTCGGGCTGACGGCCAGCGCCCATTCCGATCCGCACGTGCTGGCGGCGGTGACCGCCAATGCCCGGCCGGGCGCGCTGTTCTTCGGCATCACCTGCTCGGGCCGCACCCGCGACGTGATCGAGGCCTTCGAGACCGCCGGCACGCGGGGCCTCAAGCGCATCGTCATCACCAGCGACGAGAAGGCGCCGGTGACCAAGGTCGCCGACATCGTGCTGATCTCGGCGGTGCGCCGCTCGCCGATCGCCCGCGAGGTGATCGCCACGCGCATCTCGCAGCTCGCCATCGTCGAGACGATCTGCGTGGCGCTGGCGCTGAACCATTCGGACGCCCACGAGATCGTGCACGACACCGCGCTGCTCGAGCAGGAGATCGCCAAGAAGCGCCTGCCCGAGCGCGCCCCGCCGGCCGAGCCCACCTGA
PROTEIN sequence
Length: 317
MSSEGKILQAPPDDGATAAIDIFQKLVAAARSRDRTMAGLSQWIIANQDRAAGLSISSLAQQTGVSETTVFRFCKLLGLNGYKDLRFALAESRGLALGAQLAGLPGGGEGATEHPMASIMRRVVEVNSEQLLKTMSLVSLSALEQATEALLAANHIHLVGFGSSAPVAFDAYQRLLCLGLTASAHSDPHVLAAVTANARPGALFFGITCSGRTRDVIEAFETAGTRGLKRIVITSDEKAPVTKVADIVLISAVRRSPIAREVIATRISQLAIVETICVALALNHSDAHEIVHDTALLEQEIAKKRLPERAPPAEPT*