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berkeley_reactor_200306_biofilm_scaffold_59887_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(72..452)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L7/L12 n=2 Tax=Bradyrhizobiaceae RepID=F7QQ12_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 7.00e-53
rplL; 50S ribosomal protein L7/L12 similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 2.60e-53
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 9.90e-53

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCTGATCTTGCCAAGATCGTTGACGACCTCTCGAGCCTGACCGTGCTCGAGGCTGCCGAGCTCGCCAAGCTGCTCGAGGAGAAGTGGGGCGTGTCCGCCGCGGCTGCCGTGGCGGTTGCCGTCGCTCCGGGTGGTGGTGGCGCCGCCGCCGCTCCGGTCGAGGAGCAGACCGAGTTCACCGTCGTCCTCGCCGCCGTCGGCGACAAGAAGATCGAGGTCATCAAGGAGGTCCGCGCGATCACCGGCCTCGGCCTCAAGGAAGCCAAGGACCTGGTCGAAGGTGCGCCCAAGCCCGTGAAGGAAGGCATTGCCAAGGACGAGGCCGAGAAGCTCAAGGCCCAGCTCGAGAAGGTCGGCGCCAAGGCCGAGCTCAAGTAA
PROTEIN sequence
Length: 127
MADLAKIVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAVAPGGGGAAAAPVEEQTEFTVVLAAVGDKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGIAKDEAEKLKAQLEKVGAKAELK*