ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_73177_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(30437..31378)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EF2661 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 311.0
  • Bit_score: 501
  • Evalue 3.20e-139
peptide/opine/nickel uptake ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 307.0
  • Bit_score: 400
  • Evalue 2.90e-109
Peptide/opine/nickel uptake family ABC transporter permease {ECO:0000313|EMBL:BAF88695.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 307.0
  • Bit_score: 400
  • Evalue 1.40e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azorhizobium caulinodans → Azorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGGCCGCACCATCCTCCGCCGTCTCGGGTCCTTCGCGCTGACCTTGTTCGTCGCGTCGCTTTTGGTGTTCGCGGTGCTGGACCTGTTGCCGGGCAATGCGGCGGCCATCCTGCTCGGCACGGCGGCGCGGCCCGACACCATCGCGGCGCTCGAGCAGCAGCTCGGTCTCGATCAGCCCGGCTATGTCCGCTATCTCGCCTGGATCGTCGGCGCCTTCACCGGCGATCTCGGCCGCTCCGCCACCTATGGCGTGCCGGTCGGCGGCCTGATCGCCGAGCGCCTGGCGGTGACGCTGCCGCTCGCCGCCCTGGCGCTCGCCATCGCCGTGGCGCTGGGCGTCGGCCTCGGGGTCGCGGCCGCCGCCGGGCAGGGCAGGGCGCCCGACCGGATCGCCTCCGGCCTCGCGCAGGTCGGCATCGCCGTGCCGGACTTCTGGTTCGGCATCCTGTTCATCCTCCTGTTCTCCACCACGCTGCACTGGTTCTCCGCCGGCGGCTTCCCCAGCTGGAGCGACCCCGCGGCCGCGATGAAGGCGCTGCTGCTGCCGGCGCTCGCGCTCGCCCTGCCGCAGGCGGCGGTGCTGACGCGGGTGACGCGCTCGGCCGTGCTCGAGGTCGCCGGCGAGGACTTCGTGCGCACCGCCCGGGCCAAGGGCCTCAGCGCGCGGCGCGTGCTGTGGCGCCATGCCGTGCGCAACGCCCTGGTGCCGATCGTCACCATCGTCGGGCTGCAATTCTCCTTCCTGGTCGCCGGCGCCGTGCTGGTGGAGAACGTCTTCAACCTGCCCGGGATCGGGCGGCTCGCCTACCAGTCGCTGGCCCAGCGCGACCTCATCGTCATCCGCAACGTCGCCATGCTGTTCGCCGGCCTGGTCATCACCGTGAACTTCCTGGTCGACCTCGCCTATCTCTGGCTCGATCCGCGGCTGAGGAGGGCGTGA
PROTEIN sequence
Length: 314
MGRTILRRLGSFALTLFVASLLVFAVLDLLPGNAAAILLGTAARPDTIAALEQQLGLDQPGYVRYLAWIVGAFTGDLGRSATYGVPVGGLIAERLAVTLPLAALALAIAVALGVGLGVAAAAGQGRAPDRIASGLAQVGIAVPDFWFGILFILLFSTTLHWFSAGGFPSWSDPAAAMKALLLPALALALPQAAVLTRVTRSAVLEVAGEDFVRTARAKGLSARRVLWRHAVRNALVPIVTIVGLQFSFLVAGAVLVENVFNLPGIGRLAYQSLAQRDLIVIRNVAMLFAGLVITVNFLVDLAYLWLDPRLRRA*