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berkeley_reactor_200306_biofilm_scaffold_73177_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(31452..33041)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003645742 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 487.0
  • Bit_score: 769
  • Evalue 1.80e-219
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFG69982.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 491.0
  • Bit_score: 640
  • Evalue 1.40e-180
peptide ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 504.0
  • Bit_score: 614
  • Evalue 2.10e-173

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1590
GTGCGCGCCGCTGCGGGCGTGCCGGACCGCGGCGGCAAGGCGAGCGGCCACGAGGCCGCCGATGACGGCAACGACGTCGATACGGGGAACGGGACGATGATCACGAATCGGATCGGACGAGGGCTGGCGCTCGCCGCCGTCGCCCTGCTGTGCGGCGCCTCGCCGGCGCCGGCCAAGGATACGCTGACGCTCGGCATGGCGGTGGAGCCGACCGGGCTCGACCCGACCATCTCCGCGCCGGTGGCGATCCGCGAGGTCACCTGGGGCAACCTCTACGAAGGGCTGACCACGCTCGACAAGGACGGCCGCATCCAGCCGCTGCTCGCCACGAGCTGGACCGTCTCGCCCGACGGCCTGACCTACACCTTCAAGCTGCGCCCGGGCGTGCGCTTCCACAACGGCACGCCGTTCGACTCCTCGATCGTCAAGTTCTCGCTCGACCGGGCCCGCGCGCCCGATTCCACCAATGCCCAGAAGCAGTTCTTCGCGCCGATCGGCAGCATCGAGACGCCGGACCCGATGACGGCGGTGATCAGGCTGAAGCAGCAGGCCGGCCTCTTCCTCTACCACCTCGCCTGGGGCGATGCCGTCATGCTCGACCCCAAGACGGTCGGCACCAACAAGACCGACCCGATCGGCACCGGGCCCTTCAAGTTCAAGGCCTGGCAGCGCGGCGACCGGGTGGAGCTGGCGCGCAACGACGACTATTGGGACAAGGGCGTGCCCAAGCTCGCCGCGGTCACCTTCCGCTTCATCGGCGACGCCCAGGCCCAGGCGGCGGCGCTCAGGGCCGGCGACATCGACGGCTTCCCCAACTTCACCGCGCCGGAGCTGTTCGGCGAGTTCCAGAAGGATGCACGCTTCGCCACCGTGGTCGGCGCCACGCCGCGCAAGCTGGTCGCCGGCCTCAACAATTCCAAGCCGCCGCTCGACGATGCGAGGGTGCGCCGGGCGATGATGCAGGCGATCGACCGCAAGGCGATCATCGACGGCGCCTTCTCCGGCTACGGCACCCCGATCGGCAGCCATTTCGCCCCGACCGACCCCGGCTATGTCGACCTCACCGGCGTGCTGCCCTACGACCCGGCCAAGGCCAGGCAGCTCCTGGCCGAGGCCGGGCACGGCGACGGCTTCACCGTCACCATGAAGTGCCCGCAGATGAGCTACACCACGCGGTCCTGCGAGATCATGCAGGCCATGCTGTCCGAGGTCGGCATCACGCTCAACATCGTGCCGAGCGAGTTCCCGGCCAAATGGATCGACGAGGTCTTCGTCAAGTACGACTACGACGTCACCATCATCGATCATGCCGAGCCGATGGACATCGATATCTATGCGCGGCCGGCCTATTATTTCCGCTACAGGAACGCCGCCTTCGACGACCTCGTCGCCAAGGCCGACAAGCTCGCCGACGAGGCCGGGCGCAGCAAGCTCTACGGCGAGGCGCAGAAGATCCTGGCCGACGAGGTGCCGGCGCTCTACCTGATGGACCTGCCTCGCCTCAACATCTGGGACGCGAAGCTGCAGGGGCTCTGGCCGAACGAGCCGATCTCGCAGATGTATGTCCGTGACGCCTCCTGGGCGCAATAG
PROTEIN sequence
Length: 530
VRAAAGVPDRGGKASGHEAADDGNDVDTGNGTMITNRIGRGLALAAVALLCGASPAPAKDTLTLGMAVEPTGLDPTISAPVAIREVTWGNLYEGLTTLDKDGRIQPLLATSWTVSPDGLTYTFKLRPGVRFHNGTPFDSSIVKFSLDRARAPDSTNAQKQFFAPIGSIETPDPMTAVIRLKQQAGLFLYHLAWGDAVMLDPKTVGTNKTDPIGTGPFKFKAWQRGDRVELARNDDYWDKGVPKLAAVTFRFIGDAQAQAAALRAGDIDGFPNFTAPELFGEFQKDARFATVVGATPRKLVAGLNNSKPPLDDARVRRAMMQAIDRKAIIDGAFSGYGTPIGSHFAPTDPGYVDLTGVLPYDPAKARQLLAEAGHGDGFTVTMKCPQMSYTTRSCEIMQAMLSEVGITLNIVPSEFPAKWIDEVFVKYDYDVTIIDHAEPMDIDIYARPAYYFRYRNAAFDDLVAKADKLADEAGRSKLYGEAQKILADEVPALYLMDLPRLNIWDAKLQGLWPNEPISQMYVRDASWAQ*