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berkeley_reactor_200306_biofilm_scaffold_73177_36

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(41269..42051)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUY6_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 249.0
  • Bit_score: 248
  • Evalue 5.30e-63
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 249.0
  • Bit_score: 248
  • Evalue 1.50e-63
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACY14026.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 249.0
  • Bit_score: 248
  • Evalue 7.50e-63

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Taxonomy

Haliangium ochraceum → Haliangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGACGGATGGGCAATCGGGCGTCGCGCTCGAACACACGGACCAGCTCGTCACCTATCTGCGCGATGCGGCCAGGCTCGATGCCGACAGTCCCACCGCCCTCTATCAGCGCCTGGAAGGGGCCTTCCGCGGCGCCATCCGGGAGGCGCTGATCCCGCCGGGCGCGGCGATCCCCGGCGAGCGCGACCTCGCGCAGCGCCTCAACCTCTCGCGCGTCACCGTGCGCAAGGCGATCAAGGCGCTGGTCGACGACCGCCTGCTGGTGCAGCGTCCGGGCGCACGCACCAGCGTCGCCGACCGGGTCGAGAAGCCCGCCGGCCAGTTCACCAGCTTCTCCCAGGACATGCTGGCCCGCGGCCATCAGCCCGGCGCCGTCTGGCTCGGGCGAGAAAGGGGTGTCGCCCTGCCGGCCGAAGCCATGGCGCTCGGCCTGTCGCCGGGGGCGGAGGTCTGCCGGCTCAACCGGCTGCGCACCGCCGACGCCGAGCCGATGGCGGTCGAGTTCTCGGTGGTGCCGGCCGAGTTCCTGCCCGACCCCGACCTGGTGACGACCTCGCTCTACGAGGCGCTGGAGGCGCTCGGGCACGAGCCGGTGCGGGCGTTGCAGCGCCTGCGCTCGGCCGTGGCCGGCACCGAGGAGGCGAGGCTCCTCGGCCTCTCCCGCGGCGCGCCGGTGCTGGAGATCGAGCGCCGCTGCTTCCTCGCCGGCGGCCGCGCCGTCGAATATTGCCGCAGCCGCTACCGCGGCGACCGCTATGATTTTCTCATGGAGCTGCAGCGGTAG
PROTEIN sequence
Length: 261
MTDGQSGVALEHTDQLVTYLRDAARLDADSPTALYQRLEGAFRGAIREALIPPGAAIPGERDLAQRLNLSRVTVRKAIKALVDDRLLVQRPGARTSVADRVEKPAGQFTSFSQDMLARGHQPGAVWLGRERGVALPAEAMALGLSPGAEVCRLNRLRTADAEPMAVEFSVVPAEFLPDPDLVTTSLYEALEALGHEPVRALQRLRSAVAGTEEARLLGLSRGAPVLEIERRCFLAGGRAVEYCRSRYRGDRYDFLMELQR*