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berkeley_reactor_200306_biofilm_scaffold_73177_41

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(46090..46989)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI000374B3A9 similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 300.0
  • Bit_score: 510
  • Evalue 8.60e-142
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 301.0
  • Bit_score: 485
  • Evalue 1.10e-134
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEH90411.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 301.0
  • Bit_score: 485
  • Evalue 5.50e-134

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Taxonomy

Mesorhizobium opportunistum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
GTGGCTGACGCGACCCTTCCCGCCTTCGACCCCGAGGCCGCCGCGGCGCGCCGGCGCCACTTCGTCTCGCGCCTCGCGGTCTACGGCGTCCTCGGCGCCATCTCGCTCGTCTATGTCCTGCCGCTCCTGGTGATCGTGGCGAACTCGTTCCGGTCGCTGCCGGAGATCGCCGCCAACGGCCTGATCGCCTGGCCGAGGAGCTTCTCCTTCCACGCCTGGGCCGAGGCCTGGAGCACCTATTGCATCGGCGGCACCTGCGCCGGCATGCAGGGCAATTTCTACAATTCGCTGAAGATGGCCATTCCCGCCACGGTGATCTCGACCCTGATCGGCGCGGTCAACGGCTATATCCTGTCGAAATGGCGCTTTCCCGGCTCGGAGGCGCTGTTCGCCTGCATGACGCTCGGCGTGTTCATGCCCGGCCAGATCGCGCTGATGCCCTGGGCCTTCATCCTCGGCAAGCTCGGCCTGACCAACTCCACCTACGGGCTGATCCTGATCCACGTGGTGCAGGGCCTGTCCTTCACCACGCTGTTCTGCCGCAATTACTATCTCGGCATCCCCGACGACCTGATCAAGGCGGCGCGCATCGACGGCGCCGGCTTCTGGCGCATCTTCCGGCGCATCGTGCTGCCGCTCTCGCCGCCGATCCTGATCGTCACGGTGATCTGGCAGTTCACCGGCATCTGGAACGAGTACCTCTTCGGCGTGGTCTTCACCTCGGGCCGCGAGCAGCCGATCACCGCGGCGCTGGTGGCGCTCTCGACCAACGGCACCAATGTCCGCGTCTACGACGTGATGAGCGCCGCCGTGCTGATCGGCGCCCTGCCGCCGCTGCTGGTCTACTTCCTCGGCGGCAAGTATTTCGTGCGCGGGTTGACGCAGGGGGCGATCAAGTGA
PROTEIN sequence
Length: 300
VADATLPAFDPEAAAARRRHFVSRLAVYGVLGAISLVYVLPLLVIVANSFRSLPEIAANGLIAWPRSFSFHAWAEAWSTYCIGGTCAGMQGNFYNSLKMAIPATVISTLIGAVNGYILSKWRFPGSEALFACMTLGVFMPGQIALMPWAFILGKLGLTNSTYGLILIHVVQGLSFTTLFCRNYYLGIPDDLIKAARIDGAGFWRIFRRIVLPLSPPILIVTVIWQFTGIWNEYLFGVVFTSGREQPITAALVALSTNGTNVRVYDVMSAAVLIGALPPLLVYFLGGKYFVRGLTQGAIK*