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berkeley_reactor_200306_biofilm_scaffold_95231_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3909..4688)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003701E46 similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 258.0
  • Bit_score: 364
  • Evalue 5.10e-98
Short-chain dehydrogenase {ECO:0000313|EMBL:ESX79407.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 262.0
  • Bit_score: 315
  • Evalue 6.50e-83
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 251.0
  • Bit_score: 235
  • Evalue 1.00e-59

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Taxonomy

Mesorhizobium sp. LSHC414A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGAGCGGACAAAGACTTCTGGACCGCGTGGCCGTCGTGACCGGCGCCGCGCAGGGCATCGGCCGCGCCATCGCCGAACGGCTGGCGGCGGAAGGCGCGCGCCTCGTCATCGCCGACATCGACATCCGGCAGGCCGAGCGCACGGCGAGCGAGATCGGCGGCAACGCCATGGCCGCCGCCGTCGACATCGGCAGCGACGCCTCCGTGGCCTCGCTCGCCGCTGACGTCGCCGATCGGCACGGGCACTGCGAGATCCTGGTCAACAATGCCGCGATCCTCGACATGACCGGCATCGCCACGATGACGATGGCGCATTATCGCCGGGTTCTCGACATCAACCAGGACGGCGCGGTGCGCGTCACCCTCGCCATGCTGCCGCTGATCAGGGCGGGCGGCGAGGGGCGCCGCATCCTCAACATCGCCTCGATCATGGGGCTGCGAGGCTCGCGCGATTCCATCCCTTACTCCACCGCCAAGGGCGCGCTCGTCAATTTCACGCGGGCGCTCGCCTGCGACGTCGCGGGCGAGGGCATCGTCGTCAATGCGCTGGCCCCCGGCTTCATCGACACGCGCATGGCCCTGCTGCCCGACGGGTCCGGCCATGAGCACGAGACCGACTGGTTCAAGGACATCTACCTCAGATATGGCCGCATCCCGCTCGGCCGTGCCGGCCACCCCGGGGATATCGCCGGGCCGGCCTTCTTCCTGTGCTCCGACGATGCGCGCTATGTCACCGGGCAGATCCTGCTCGTCGACGGCGGCGTGTCGGCAACCTTCTGA
PROTEIN sequence
Length: 260
MSGQRLLDRVAVVTGAAQGIGRAIAERLAAEGARLVIADIDIRQAERTASEIGGNAMAAAVDIGSDASVASLAADVADRHGHCEILVNNAAILDMTGIATMTMAHYRRVLDINQDGAVRVTLAMLPLIRAGGEGRRILNIASIMGLRGSRDSIPYSTAKGALVNFTRALACDVAGEGIVVNALAPGFIDTRMALLPDGSGHEHETDWFKDIYLRYGRIPLGRAGHPGDIAGPAFFLCSDDARYVTGQILLVDGGVSATF*