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berkeley_reactor_200306_biofilm_scaffold_95231_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(5491..6330)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF1C37 related cluster n=1 Tax=unknown RepID=UPI0003CF1C37 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 275.0
  • Bit_score: 302
  • Evalue 3.30e-79
ABC transporter permease {ECO:0000313|EMBL:ESY86757.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 275.0
  • Bit_score: 302
  • Evalue 4.70e-79
ABC-type spermidine/putrescine transport system, permease component I similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 275.0
  • Bit_score: 298
  • Evalue 1.80e-78

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Taxonomy

Mesorhizobium sp. LNHC220B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGGGCCGGCTCACCCGCCTGGCGGTGTTCGGCCTGGTCATGGCCGGGCCGATCCTCTTCGTCGTCGTGCCGATCGGCGCCTTCCTCGTGATGTCGTTCTGGCGGGTCGAGAACCAGCAGATCGTGCCAGCCGCCACGCTCGACAACTACGCCGCGTTCTTCGGCAACTGGGCCTATCTGAAGACGTTCCTCCTGACCCTGCTCCTGTGCGCGGAGGTCACGGCCATCGACGTCCTCGTCGGCTATCCCATCGCCTACTTCATCTGGCGCCGGCGCGGCCGCAGCCGATACATCCTGCTGCTGCTCTTCGTCATCCCCTTGTTCATGAGCTACATCGTCAAGATCTACACGATGCGCTCGATCCTCGGCCTCAACGGCTTCCTCAACCAGATGCTGGTCGCAAGCGGCCTCCTGGCCCAGCCGAGCCTGCTCTTCCTCTACAACCAGACGGCGATCCTGATGACCATGGCCGTCATCTTCCTGCCCTTCGTCATCCTGCCGATCTTCCTGTCGCTCGAACGCATCCCCCGCAGCCTGCTCCAGGCCTCCTCGGATCTCGGCGCCGGGCTGGCGACGACGGTCCGGCATGTGGTGCTGCCGCTGTCGCTTCCCGGCACGATCGCCGGGGCGCTCTTCACCTTCGTGCTGGCGCTCGGCGACTACATCACCCCGCAGATGGTCGGCGGCCCCTCGGGCTTCACCTTCGGCCGCGTGATCTGGTCGCAGTTCGGCCTGGCCTATAATTGGCCCTTCGGGGCCGCCATGGGCGTGGTCCTCTTCGCCGTCGCGCTCGTTGCGATCATTGGCGGCGGCCATGCCGCCCGCCGCCAGAGGGTGTGA
PROTEIN sequence
Length: 280
MGRLTRLAVFGLVMAGPILFVVVPIGAFLVMSFWRVENQQIVPAATLDNYAAFFGNWAYLKTFLLTLLLCAEVTAIDVLVGYPIAYFIWRRRGRSRYILLLLFVIPLFMSYIVKIYTMRSILGLNGFLNQMLVASGLLAQPSLLFLYNQTAILMTMAVIFLPFVILPIFLSLERIPRSLLQASSDLGAGLATTVRHVVLPLSLPGTIAGALFTFVLALGDYITPQMVGGPSGFTFGRVIWSQFGLAYNWPFGAAMGVVLFAVALVAIIGGGHAARRQRV*