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berkeley_reactor_200306_biofilm_scaffold_95231_84

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(86355..87398)

Top 3 Functional Annotations

Value Algorithm Source
RbsB protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D050_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 336.0
  • Bit_score: 449
  • Evalue 2.10e-123
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EDQ34926.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 336.0
  • Bit_score: 449
  • Evalue 2.90e-123
sugar ABC transporter periplasmatic substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 333.0
  • Bit_score: 426
  • Evalue 7.00e-117

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Taxonomy

Hoeflea phototrophica → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGACGACCATCTTCGACCGGCGCAGCATCGCCCTGATGCTGGGCGCAGCCATGCTCGGCATGGCCGGCGCGGCTGCCGCCGCGGACTATCCCGCCCCCGTGCCGCTCGCCCAGGGCTCACAGGCCGATACCAAGGCGTTCAAGCCGACGGCCAAGATCACCATCGCCTACATGCCGCCAGCGACGGAGTTCAACTACTACATCGCCATCGGCGAGGGCATCAAGGCGAGGGCGGCCAAGGCCGGGGTCGACACCTTCATGCTGGCGCCGCAGTCGGGCGCCGACATCAACGGCCAGATGGGCATGATCCAGGACGCCATCACCCGCAAGGTCGACGCCATCATCCTCTCCACCCATGACGAGGCGGCGGCCGCCCCACTGGTCAAGCTGGCGGTCGACAAGGGCATCGCGGTCATCGTCGTCAATTCCGACATCGCCGCTTTCCCGACCCCGGTCCATGCCGTGGTCGGCTATTCCCAGCGCAAGGGAACGCATCTGATCGGCGACTATCTCCTGAAGAAGCTCGCCGGCAAGCCGGCCACCGTCGCCGTGATCGAAGGGCAGCCCGGCTACCATTCGACCGAGCGGGTCGGCGGCTTCCTCGACGCGGTCAAGGGCACGCCCGGCATCACCGTCAAGGCCTCGATCCCCGGCGGCTGGAACGTCGAGGGCGGCAACACCGCGGCGATGGACCTGCTGCAGGCCAATCCCGACGTCGACGTGGTGTTCGCCGCCAACGACTACATGATCATGGGCGCGGCGCTGGCGGCCAAGTCGCTCGGCCGCTCCGGCCTGACCCTGCTCGGCAATGACGGCGACACGGCCGCGCTGGAGGAGATCCAGGCCGGCACGGTGACGGCGACGGTGAACACCACGCCCTTCGTCATGGGCGAGATCGCCTTCGACGTCACGCTGGACGTGCTCAACGGCAAGTTCCCCGGCGGCTTCGTCGAGACGCCGGAGAACATCGTCGACAAGGACACCGTCCTGCCGGTGCTCCAGGCCGCCGACCGGCTCTATCCCAAGCCGAGCCGTTCCTACTGA
PROTEIN sequence
Length: 348
MTTIFDRRSIALMLGAAMLGMAGAAAAADYPAPVPLAQGSQADTKAFKPTAKITIAYMPPATEFNYYIAIGEGIKARAAKAGVDTFMLAPQSGADINGQMGMIQDAITRKVDAIILSTHDEAAAAPLVKLAVDKGIAVIVVNSDIAAFPTPVHAVVGYSQRKGTHLIGDYLLKKLAGKPATVAVIEGQPGYHSTERVGGFLDAVKGTPGITVKASIPGGWNVEGGNTAAMDLLQANPDVDVVFAANDYMIMGAALAAKSLGRSGLTLLGNDGDTAALEEIQAGTVTATVNTTPFVMGEIAFDVTLDVLNGKFPGGFVETPENIVDKDTVLPVLQAADRLYPKPSRSY*