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berkeley_reactor_200306_biofilm_scaffold_95231_95

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(103193..104137)

Top 3 Functional Annotations

Value Algorithm Source
Threonine dehydratase n=1 Tax=Rhizobium sp. CF122 RepID=J2IJ45_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 314.0
  • Bit_score: 536
  • Evalue 1.20e-149
Threonine dehydratase {ECO:0000313|EMBL:EJL48728.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 314.0
  • Bit_score: 536
  • Evalue 1.70e-149
pyridoxal-5'-phosphate-dependent protein beta subunit similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 314.0
  • Bit_score: 529
  • Evalue 5.30e-148

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGACAAAACAAGCGCCTCTCTCAGCCACGAACATCGAGGATGCGCGCAGGCGCATCGATCCGATCTTTCTGAACACCAGCCTGCTGCATTCCGAAAGGCTGGCGCTGTCCCTCGTCGCAAAGGACGAAACGGACAACCCGATCCGCAGCTTCAAGGGGCGCGGTACAGGGTATTTTTGCGCAGATCTCACCGACGCCGGAGCGCCTCTGGTCACGGCATCGGCCGGGAACTTTGGTCAGGGGCTTGCCTATAATGCCGCGCGGCATGGGCGACCTCTGGTCGTCTTCGCGAGCCTGAAGGCCAATCCGCTGAAGATCGATGCCATGCGCAGGTTTGGGGCGGAGGTCCTTCTCGTCGGGGAGGACTTCGACGCTGCCAAGGAAGCCGCCAAGACCTACGCCGGCGAACGGAATCTGCAGTTCGTCGAGGACGGTGCGAGCGCAGCCATCGCGGAAGGGGCTGGAACGATCGCGGCGGAACTGACCGAAGAGGTCGAAGATATCGACGCAGCTTTCATTCCGCTCGGCAACGGTGCGCTGGCGGCCGGAATAGGGTGCTGGTTCAAGTCGAGATCGCCGCTGACAAGGGTCGTCGCCGTTGCCGCAAAGGGCGCGCCCTGCATGGCTCTGTCCTACAAGGCGGGTGAAGTGATCTCGACCCGCGAGGCTTGCACGATCGCCGACGGAATTGCTGTCCGGAATCCCGTGCCGTCGGCGATCGCATGGCTCAAGGAAACCATCGACGACGTCGTTCTCGTCGATGACGACCAGATTCTGGATGCGATGCGGTTCGCCCATGAAACATGGAACCGCCTCGTCGAGCCGGCCGGAGCGGCGGGGCTCGCAGCCGTTCTCGCACAAGCGTCTGCGCTGAACGGCAGCCGCGTCGCGACCATCTTGTGTGGTGCGAACCTCACGGATCAACAGATCAAGGCATGGCTTTGA
PROTEIN sequence
Length: 315
MTKQAPLSATNIEDARRRIDPIFLNTSLLHSERLALSLVAKDETDNPIRSFKGRGTGYFCADLTDAGAPLVTASAGNFGQGLAYNAARHGRPLVVFASLKANPLKIDAMRRFGAEVLLVGEDFDAAKEAAKTYAGERNLQFVEDGASAAIAEGAGTIAAELTEEVEDIDAAFIPLGNGALAAGIGCWFKSRSPLTRVVAVAAKGAPCMALSYKAGEVISTREACTIADGIAVRNPVPSAIAWLKETIDDVVLVDDDQILDAMRFAHETWNRLVEPAGAAGLAAVLAQASALNGSRVATILCGANLTDQQIKAWL*