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berkeley_reactor_200306_biofilm_scaffold_95231_116

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(123501..124610)

Top 3 Functional Annotations

Value Algorithm Source
ugpC-2; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC 2 (EC:3.6.3.20) similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 369.0
  • Bit_score: 486
  • Evalue 3.60e-135
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 369.0
  • Bit_score: 486
  • Evalue 1.80e-134
sn-glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Kaistia granuli RepID=UPI000374AAC1 similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 365.0
  • Bit_score: 492
  • Evalue 2.30e-136

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGACCGAGATCGCCATGCGCAAGGTGCGCAAGAGCTATGGCCGCACCGAGATCGTCCACGGCGTCGACCTCGAGATTCGCCAGGGCGAGTTCATCGTCGTCCTCGGCCCTTCGGGCTGCGGCAAGTCGACCCTGCTGCGGATGGTCGCCGGGCTGGAGGAGATCACCTCCGGTGAGATCGCCATCGGCGGCACGGTGGTCAACCGGCTGGAGCCGCGCCAGCGCGGCTGCGCCATGGTGTTCCAGAATTATGCGCTCTATCCCCACATGACCGTGGCGGGCAATATCGGCTACGCGCTCAAGGTCGCCCGCGTCCCCAAGGCCGAGCGCCAGGCGCGCGTGCTCAAGGTCGCCACCTCGCTCGGCCTGGAGACGATGCTCGACCGCAAGCCGGCTGCGCTCTCCGGCGGCCAGCGCCAGCGCGTCGCCATGGGCCGCGCCATGATCCGCGAGCCCAAGGTGTTCCTGTTCGATGAGCCGCTCTCCAATCTCGATGCCCGGCTGCGCGTGCAGATGCGGGCGGAGATCCGCCGCCTGCACCAGCGCCTCGGCACCACCTCGATCTTCGTCACCCACGACCAGGTCGAGGCCATGACGCTCGCCGACCGGCTGGTGGTGATGAACCAGGGCCGGGTCGAGCAGGTGGGCACACCCTCGGCCGTGTTCACAACCCCGGCCACCCGCTTCGTCGCCGGCTTCATCGGCTCGCCGCCGATGAACCTGCTCGACGGCGAGGTCGAGGCCGACGGCGCCTTTGTCTTCGCCGGGCGCCACCGCATCGCGCTCGCCGGCTCCGCGAGCCAGGCCCTGCGCGGCCAGAAGCTCACGCTCGGCGTTCGTCCGGAGGCGATCGCGATCGGGCCGCCCGACACGCCCGGCAGCCTGCAGGCCACCGTGGATTTCGTCGAGGATCTCGGCACCGGCCGCATCGTGCAGACGGACCTCGACGGCATGCCCTTCGCTGTGGCGATCGCAGACGCTCGCTCGCTCAGCCCGGGCCAGCCGGTCGGCCTGTCGGTCCCGCCGGACGCCGCCCACCTGTTCTCGCGCGAGTCCGGCCTGCGGCTGGACGGCGCCACGGCCGAACCAGCCCGCATCCTGGCGGCTTGA
PROTEIN sequence
Length: 370
MTEIAMRKVRKSYGRTEIVHGVDLEIRQGEFIVVLGPSGCGKSTLLRMVAGLEEITSGEIAIGGTVVNRLEPRQRGCAMVFQNYALYPHMTVAGNIGYALKVARVPKAERQARVLKVATSLGLETMLDRKPAALSGGQRQRVAMGRAMIREPKVFLFDEPLSNLDARLRVQMRAEIRRLHQRLGTTSIFVTHDQVEAMTLADRLVVMNQGRVEQVGTPSAVFTTPATRFVAGFIGSPPMNLLDGEVEADGAFVFAGRHRIALAGSASQALRGQKLTLGVRPEAIAIGPPDTPGSLQATVDFVEDLGTGRIVQTDLDGMPFAVAIADARSLSPGQPVGLSVPPDAAHLFSRESGLRLDGATAEPARILAA*