ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_131

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(140013..140912)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Enterobacter cloacae S611 RepID=V5ACL9_ENTCL similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 295.0
  • Bit_score: 210
  • Evalue 1.40e-51
Uncharacterized protein {ECO:0000313|EMBL:KDP72999.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 296.0
  • Bit_score: 449
  • Evalue 2.50e-123
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 293.0
  • Bit_score: 206
  • Evalue 7.60e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAACTGGAACGACATCCGCTACTTTCTCGCTGTCGCGCGCCGGGGCGGCCTGACCGGCGCTTCGCAGGACCTGGGTGCGAGTCCCTCCACCGTGGCGCGCCGGATCGAAACCTTGGAGGCTGCGCTGCGAACCCGGCTGTTCGAGCGACGGCCGGACGGCTACGGGCTGACCGAAGTCGGGCACGCCATGATCGAAAAGGCCATGGCGATCGAAGCGGCGATGGTCGATCTGCAGGACGGATTCGGCGAGCGGGACGGCCGCGTCTCCGGGACGGTGCGGATCGTCACCGTCGAAACGCTCGCGCACCATCTCCTGATTCCCAGCCTGCCCCGGCTCCAGGAAGCCTGCCCGGATCTCTCACTGGGAGTCGTGGTCAACGCGATGTCGTTCTCTCGCCTGCCCCAGAGAGAGACGGATATCGGTTTGCGCCTCTGCCGGCCGGAGCAGGGCAATTTTCTCGTCCGGCGCATCGGAACGATCGCATTCGGCCTCTATGGATCGAAGGCGTATGTCGCCGGCCATCCCATTGTGGAGGATCGACTGCCCATAGCCGGTCATCGGCTGATCACATGGGGCGATTCACTTTCGTTCCTCGCTTTGCCAAGAGCGCTCCGGTCCTGGACGGAAAGCGGCATTGCCACACTCATGGTCGATTCCATGCAGGCGCAGGTTCTGGCCATCAAGGCGGGAAATGGCCTGGGTGTCCTTCCCTGCATCCTGGCGGATGGTGAAGGGCAACTGTCGCGGATCAAGCCCGAGCTGTGTCGGCAGGAGGAAGCCATCTGGCTGGTCGTCCATGAGGCCGTTCGGCATATGAAGCGCGTGCGTGTGGTCAGCGATTTCATCGAGACGATCGTCAGGCAGCATCAACCGGCCCTTGCCGGACTGGCACCCTGA
PROTEIN sequence
Length: 300
MNWNDIRYFLAVARRGGLTGASQDLGASPSTVARRIETLEAALRTRLFERRPDGYGLTEVGHAMIEKAMAIEAAMVDLQDGFGERDGRVSGTVRIVTVETLAHHLLIPSLPRLQEACPDLSLGVVVNAMSFSRLPQRETDIGLRLCRPEQGNFLVRRIGTIAFGLYGSKAYVAGHPIVEDRLPIAGHRLITWGDSLSFLALPRALRSWTESGIATLMVDSMQAQVLAIKAGNGLGVLPCILADGEGQLSRIKPELCRQEEAIWLVVHEAVRHMKRVRVVSDFIETIVRQHQPALAGLAP*