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berkeley_reactor_200306_biofilm_scaffold_95231_133

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(142037..142951)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037808EF similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 270.0
  • Bit_score: 323
  • Evalue 1.20e-85
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EHR51309.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 287.0
  • Bit_score: 318
  • Evalue 5.30e-84
ybfI; AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 264.0
  • Bit_score: 313
  • Evalue 4.50e-83

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Taxonomy

Saccharomonospora marina → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGCAGGAGACGCTAGGCCGCAGCCGTGCAGTCGGTCTTGAAGGCTTGTGCGGGGCGGCCGGCGCGGACCGCCGCGCCCGCCCGCGCATCCGCATGGGCTGTCCGGCCCCCGGGATCGAACGCCTCGAGGCCCATCTCTTCGGTCAGGCCTATTCGCCGCATCGCCACGACGTCTATGCGATCGGGGTGACGCTGTCGGGTGCCCACCTCTTCGGCTACCGCGGCGAGCGGCGCGTCTGCGATCCCGGCCACGGCCACGTGCTGCATCCCGACGAGGTTCATGACGGCGGCGCCGGCACCGAGGAGGGCTTCGGCTATCGGATCATGTATGTCGATCCCGCGCTGATCCAGGCGGCGCTCGGCGGCCGGCCGCTGCCCTTCGTCGCCGACCCCGTCGTCCGGCCGGCGGATCTGGCCCCGGCCTTCGTCGCGAGCCTGGCCGACCTCGATGCGCCGATCGGCGAGGTCGAGCGCGTCGAGGTCGCGGTCGCCGTCGCCGACATGCTGGAAGGCCTTGCTGCGCCGACCCGTAGGGGAAGCCGCGCTGCCCCGCTGCACGTCGAGGCCATGTCTCGTGTGCGCGCGCTGATCGCCGACGATCCGGCCGTCGCCCATTCCGCCGAGGGGCTCGAACGTGCGGCCGGCCTCGATCGCTGGACGGTCGCGCGCCAGTTCCGGGCTGTCTTCGGCACCAGCCCGAGCCGCTTCCGCACCATGCGCCGGCTCGACCAGGCGCGCCGCATGATCGGGGAGGGGATGCCCCTCTGCGACGCCGCGCTGGCCGCCGGCTTCGCCGACCAGAGCCACATGTCGCGGCTGTTCCGAGGGACCTGGGGCCTGACACCGGGCCGATGGGCGGCGCTCGCCGGGCAGCGCGATGCCGGCCGTCCCGAGCCGGTGGAGCAAAGAAGGTGA
PROTEIN sequence
Length: 305
MQETLGRSRAVGLEGLCGAAGADRRARPRIRMGCPAPGIERLEAHLFGQAYSPHRHDVYAIGVTLSGAHLFGYRGERRVCDPGHGHVLHPDEVHDGGAGTEEGFGYRIMYVDPALIQAALGGRPLPFVADPVVRPADLAPAFVASLADLDAPIGEVERVEVAVAVADMLEGLAAPTRRGSRAAPLHVEAMSRVRALIADDPAVAHSAEGLERAAGLDRWTVARQFRAVFGTSPSRFRTMRRLDQARRMIGEGMPLCDAALAAGFADQSHMSRLFRGTWGLTPGRWAALAGQRDAGRPEPVEQRR*