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berkeley_reactor_200306_biofilm_scaffold_95231_155

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 161547..162260

Top 3 Functional Annotations

Value Algorithm Source
His/Glu/Gln/Arg/opine family amino acid ABC transporter permease n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HYK8_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 234.0
  • Bit_score: 285
  • Evalue 3.60e-74
ABC transporter permease {ECO:0000313|EMBL:ETM65737.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 234.0
  • Bit_score: 285
  • Evalue 5.00e-74
amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 234.0
  • Bit_score: 282
  • Evalue 1.10e-73

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Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGCCACATTCCTCGACCTGCTCGCCTGGGGCGACACCGGCTGGAGCAGGGCTCTGGTCGGCGGCGCGCTCGTCACGATCGAGATTTCCGCCATCGCCTTTCCGATCGGCATCCTGGTCGGCGGCGCCGCCGCCTGGGCCAAGATGCAGGGGCCGGCCTGGCTCGCGGCGCTCGCCCGCGGCTACACCACGATCTGCCGCTCGGTGCCGGACCTCCTCCTGATCCTGCTGCTCTACTATGCCGGCCAGTCGCTGCTCAACGCGTTGCTGGCCCTGCTCGGCTTCGGCGACGTCGGCATTTCCGGCTTCGCTGCCGCCACCGTCGTGCTCGGGCTGGTGCAGGGCGCCTATGCTTCGGAGATCCTGCGCGGCTCCGTGCTGGCCATCCCGAGGGGCCAGACCGAGGCCGCCCGCGCCTATGGGTTCCACGGCCTCAGCCTGTTCCGGCGCGTCACCGTGCCCGCCATCATCCCCTATGCGCTGCCGGGCCTGGCCAATCTGTGGATGGTGATCCTGAAGGATTCGGCCCTGATCAGCGTGGTGGGCACGAGCGAGCTCCTGTTCACCGCGCGCCAGGCGGCGGGGGGCACGAAATATTATCTCGGCTTCTATCTCGTGGCGGCGGCGCTCTACTACGCGATCACGCTCCTGTCGAATATCGGCATCCGGATGATCGAAGCCCGGATCGGCCGCTGGATGCCGAGGAGCGCATGA
PROTEIN sequence
Length: 238
MATFLDLLAWGDTGWSRALVGGALVTIEISAIAFPIGILVGGAAAWAKMQGPAWLAALARGYTTICRSVPDLLLILLLYYAGQSLLNALLALLGFGDVGISGFAAATVVLGLVQGAYASEILRGSVLAIPRGQTEAARAYGFHGLSLFRRVTVPAIIPYALPGLANLWMVILKDSALISVVGTSELLFTARQAAGGTKYYLGFYLVAAALYYAITLLSNIGIRMIEARIGRWMPRSA*