ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_159

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 165523..165990

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IXE7_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 150.0
  • Bit_score: 210
  • Evalue 7.30e-52
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 150.0
  • Bit_score: 210
  • Evalue 2.10e-52
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABD07113.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 150.0
  • Bit_score: 210
  • Evalue 1.00e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGCCCTCTTCGCCTGACCAGCGCCTTGTCGAACTCGGCATCACGCTGCCCACGCCCGCGGCTCCGGTCGCCAACTATGTCGGCGTGGTGCGCAGCGGCAATCATCTCGTCATCTCCGGCCAGCTCTGCTTCGGGCCGGACGGCAAGCTCGCCGCGACCGGCAAGCTCGGTGCCGGCGTCGCCGTCGAGCAGGCCAAGGCCGCGGCGCGCCTGTGCGCCATCAACGTGCTGGCGCAGGTCCGGGCAGCGGTGGGATCGCTCGACAAGGTGGTGCGCGTCGTGCGTCTCGGCGGTTTCATCGCCGCCACGCCCGACTTCACCCAGCACCCCGCCGTGATGAACGGGGCCTCCGACCTGATGGTCGAGGTGTTCGGGGAGATCGGCCGTCACGCCCGTTCGACCATCGGCGTGCCGTCCCTGCCGCTCGACTCGGCCGTCGAGGTCGAAGCCCTGATCGAAGTCACCTGA
PROTEIN sequence
Length: 156
MPSSPDQRLVELGITLPTPAAPVANYVGVVRSGNHLVISGQLCFGPDGKLAATGKLGAGVAVEQAKAAARLCAINVLAQVRAAVGSLDKVVRVVRLGGFIAATPDFTQHPAVMNGASDLMVEVFGEIGRHARSTIGVPSLPLDSAVEVEALIEVT*